DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and Y43F8B.19

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001123044.2 Gene:Y43F8B.19 / 6418801 WormBaseID:WBGene00077688 Length:243 Species:Caenorhabditis elegans


Alignment Length:215 Identity:56/215 - (26%)
Similarity:89/215 - (41%) Gaps:15/215 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 LQVEPVHLDPDINVYHGMLSSKQI---LSIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTWLD 377
            ::||.|...|.:.:|..:.:.||:   |.:.|....||.:   |....|...|..:|.:..|.:.
 Worm    22 VKVEVVAWRPGLVIYRDLFTGKQVRDHLELMEHLKFEEQL---VVNDDGNDIVSKIRRANGTQVF 83

  Fly   378 YKS-PVMNSVGRIIQ-FVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE------GDR 434
            ::. |...|:....: .:...:...||.:...:|..||.|..|.||......|.::      |:|
 Worm    84 HEDHPAARSIWDTAKNLLPNLNFKTAEDILALSYNPGGHYAAHHDYLLYPSEKEWDEWMRVNGNR 148

  Fly   435 ISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGN 499
            ..|.:......|.||.|||.:|...:....|....|.|...:...:..:.|||||:..|.|:|..
 Worm   149 FGTLIMAFGAAESGGATVFPRLGAAVRTKPGDAFFWFNAMGNSEQEDLSEHAGCPIYKGQKQIST 213

  Fly   500 IWMHSGYQEFRRPCNLTSDS 519
            ||:....|..... .|:|||
 Worm   214 IWLRMRDQPILEQ-TLSSDS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528
P4Hc 335..503 CDD:214780 46/178 (26%)
Y43F8B.19NP_001123044.2 P4Hc 43..217 CDD:214780 46/176 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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