DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaSG2 and zgc:152670

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001070123.2 Gene:zgc:152670 / 557059 ZFINID:ZDB-GENE-060929-954 Length:490 Species:Danio rerio


Alignment Length:535 Identity:154/535 - (28%)
Similarity:260/535 - (48%) Gaps:84/535 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IFQLIIW-VGVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWA 74
            :|.:..| |.:...||:||||.:..|...||.||:....|::::::.|       :::|      
Zfish     8 LFVVCSWFVSITEQEFFSSVDQVSQLFNEEENLLDTFSLYIDAEEENL-------KKMK------ 59

  Fly    75 TSQLKL------------DDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSR 127
             |.|.|            ::.:..|:.||:|:|||..:|.:     |.....:..::.|..:|..
Zfish    60 -SLLLLLQLGSFSNPQSPEETMRDPVAAFKLLKRLRHEWVN-----IAKFTQQSLYQEFQTLLDY 118

  Fly   128 DLGYPDQSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQR 192
            .| .|:..::..|..||..||::|.|...::..        .:.|...|.|.||:..::..::|.
Zfish   119 SL-IPELEDINSAALGLIGLQEIYKLYPHNITK--------ETPLSADEAYYIGLVAYEEDKFQH 174

  Fly   193 SLEWLQVAFILLRNSPREEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTHSAQQT 257
            :..|...:...|.:.....|      :|:..:.|.:.::.|:...|.....::|...|::...:.
Zfish   175 AFLWFLHSLNRLTDFSSTTK------NDLLRFLSSSAYQFGSLPVAIYFGQKLLNLDPSNEEIKV 233

  Fly   258 QKYLESRVPGKNVQET-KPSWF-------SNYTRLCQGRRLPEERSGD---PLRC-YLDGKRHAY 310
            |..|...:   .:|.| .|..|       ::|..||:|.  .:||:..   .|.| |..|..:..
Zfish   234 QLGLYRLI---RLQRTSNPDIFTLNTQSNNSYEALCRGE--VDERTSKRQRALSCRYSTGGGNPR 293

  Fly   311 FTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTW 375
            ...||::.|.:..:|.|..||.::|..:|.:: ::..:.|:.||..    |.|.:.|:|.||..:
Zfish   294 LMYAPVKEEELWDEPKIIRYHDVISDTEIETL-KDIARPELTRSQT----GWGVISDIRTSQSVF 353

  Fly   376 LDYKSPVMNSVGRI---IQFVSGFDMAGAEHMQVANYGVGGQYEPHPDY-FEVNLPKNFEGDRIS 436
            |:    .:.:|.||   |..::|..:..||.:.|.|||:||:|.||.|. .|||       :|.:
Zfish   354 LE----EVGTVARISQRIADITGLSVESAEKLHVQNYGIGGRYTPHFDTGDEVN-------ERTA 407

  Fly   437 TSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIW 501
            |.:.|:||||.||.||||.:.|.:.|.||:.|.|:|||::..:|.:|.||||||:||:|.:.|.|
Zfish   408 TFLIYMSDVEVGGATVFTNVGVAVKPEKGSAVFWYNLHKNGELDLKTKHAGCPVLVGNKWVANKW 472

  Fly   502 MHSGYQEFRRPCNLT 516
            :|...|||||||:|:
Zfish   473 IHEFGQEFRRPCSLS 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 34/146 (23%)
P4Hc 335..503 CDD:214780 67/171 (39%)
zgc:152670NP_001070123.2 P4Ha_N 26..150 CDD:285528 34/143 (24%)
P4Hc 318..474 CDD:214780 67/171 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.