DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and PH4alphaNE2

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster


Alignment Length:567 Identity:157/567 - (27%)
Similarity:267/567 - (47%) Gaps:76/567 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLDRHCLYIGIFQLIIWVGV-----ANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFY 60
            ||....:.:|:..|.:..|.     |...|..||.:|.|:..:|::|::......|:..::....
  Fly     1 MLFWRLVLLGMLYLSLSFGQLRENNAQQRFARSVVNMDDMLNLEDDLVSNVEKLAEALARKAKTI 65

  Fly    61 RRYV-EQIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEV 124
            :..| :.:||..|:.:|.    :...:|:..|.||:.:..:|  |::...|.....:|...||: 
  Fly    66 KWGVFKMMKRRQEYKSSM----EIFANPIDTFSLIRHMQSNW--LMWLLYLETPVGQEELFFVD- 123

  Fly   125 LSRDLGYPDQSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGE 189
             ||....|...:...|.:|:.::|..|.:.:||:|.|::.|:.|.|.|:..:|..||:.|.:...
  Fly   124 -SRMPLLPKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSR 187

  Fly   190 YQRSLEWLQVAFILLRNSPREEKDADHYLSDIREYASMANFE-LGNPKKA--ARLLSQILESQPT 251
            :..:.:|:..:.        |..|         :.:|..:.| |..||.|  .|:|.|:...|..
  Fly   188 WYAAEQWISASI--------EAYD---------QKSSQTDMELLRGPKLADLCRILGQVQMKQRN 235

  Fly   252 H-------------SAQQTQKYLESRVPGK------NVQETKPSWFSNYTRL-----CQGR-RLP 291
            |             |....:.|.|.|:..|      :::..:....:::.||     |.|| ::|
  Fly   236 HEGALQAYQVALKLSPHDPEIYEEYRILEKRDLTLSDIEPIEQDKDNSHERLVLPPCCSGRCQVP 300

  Fly   292 EERSGDPLRCYLDGKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAV 356
            ...|.  |.|..:.....:..|||::.|.:.:||.:.:.|.|:|.|: .::...:.||.|:.||.
  Fly   301 RNLSN--LYCVYNHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKE-STLIRTSSKEHMLPSAT 362

  Fly   357 A---GSGGEGTVRDLRVSQQTWLDYKSPVMNSVGRIIQFV---SGFDMAGAEHMQVANYGVGGQY 415
            .   .|..|..|...|.|:..|  |.|...::..:|.:.:   :|.||...|..||.|||:||.:
  Fly   363 TDPDASDDETQVDTYRTSKSVW--YSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFF 425

  Fly   416 EPHPDYFEVNLPKNFEG--DRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLH 478
            |.|.|.. ::....|.|  |||:|::|||::|.|||.|.|.:||:.:.|..|:.:.|:||....:
  Fly   426 ETHLDML-LSEKNRFNGTSDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLDTKGN 489

  Fly   479 VDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRPC---NLTSDSYKS 522
            ....:||.|||||||||.:.:.|::...|||.|||   :|:|:...|
  Fly   490 DHMGSLHTGCPVIVGSKWVMSKWINDMGQEFTRPCVESSLSSNEVLS 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 33/135 (24%)
P4Hc 335..503 CDD:214780 64/175 (37%)
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 33/135 (24%)
TPR repeat 175..200 CDD:276809 5/32 (16%)
TPR_16 176..254 CDD:290168 18/94 (19%)
TPR repeat 219..249 CDD:276809 6/29 (21%)
TPR_2 220..253 CDD:285020 7/32 (22%)
P4Hc 342..513 CDD:214780 63/174 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461783
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 1 0.950 - 0 Normalized mean entropy S4458
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1211.860

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