DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and PH4alphaNE1

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_733374.1 Gene:PH4alphaNE1 / 43625 FlyBaseID:FBgn0039780 Length:537 Species:Drosophila melanogaster


Alignment Length:553 Identity:193/553 - (34%)
Similarity:289/553 - (52%) Gaps:59/553 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LYIGIFQLIIWVGVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREH 71
            |.:|:..|:....:|: :::||:..::||...|:.|....||.|.:.|..|......:..|::||
  Fly     6 LLVGLIFLLAQGSLAS-DYFSSITGLEDLLHTEQYLTRELRSKVNAIQTALQQLESELSSIEKEH 69

  Fly    72 EWATSQLKLDDYLGHPLHAFRLIKRLVRDWD------SLIFEPILANNAREEFRAFVEVLSRDLG 130
            ..|.|.  .::||.:|::.:||:|||..||.      .|:.|.:..|..||          ..|.
  Fly    70 TMAASD--TENYLTNPVNVYRLMKRLHTDWSLMEGRVQLMAEEMNFNATRE----------YGLS 122

  Fly   131 YPDQSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLE 195
            ||.|.:::||...|.|||..|.|..:.:|.||:.|:.||||:.|::|:|:|.|||::.:|..:..
  Fly   123 YPSQEDVEGAALALVRLQSTYKLDVAQVAQGILNGVKYGSDMSWQDCFELGQQLFEMEDYNNTKV 187

  Fly   196 WLQVAFILLRNSPREEKDADHYLS----------DIREYASMANFELGNPKKAARLLSQILESQP 250
            ||:.:...||   |:...|..:|:          :..|..:.:.|:||:...|..|..::|:..|
  Fly   188 WLRESMERLR---RQTSHAPSHLAPTSGPDTVTLNKMEATAKSLFQLGDFDTAFELSQRVLQFDP 249

  Fly   251 T-----HSAQQ--------TQKYLESRVPGKNVQETKPSWFSNYTRLCQGRRLPEERSGDPLRCY 302
            .     |...:        ...||.......::.:.    |:.|.::|:|...|..|  ..|||.
  Fly   250 KRIRNWHLGDKGTAPPEDIDDVYLPKHSDSYSLSQE----FAKYEKVCRGEVHPIVR--QELRCR 308

  Fly   303 LDGKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAG-SGGEGTVR 366
            .....|.|..||||::|...|||.:..:|.:||..:|..:.|.| ...|.||.|.. .||:....
  Fly   309 YSRGNHPYRFLAPLKLEEHSLDPYVATFHDILSPGKISQLREMA-VPRMHRSTVNPLPGGQLKKS 372

  Fly   367 DLRVSQQTWLDYKS-PVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNF 430
            ..|||:..||.|:| |.|..:.|.::..:|.|....|.:|||||||||.||||.|:|..  |.::
  Fly   373 AFRVSKNAWLAYESHPTMVGMLRDLKDATGLDTTFCEQLQVANYGVGGHYEPHWDFFRD--PNHY 435

  Fly   431 ---EGDRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIV 492
               ||:||:|::||||:|||||.|.|..|::.:.|..|.::.|:||||||..|.||.||||||:.
  Fly   436 PAEEGNRIATAIFYLSEVEQGGATAFPFLDIAVKPQLGNVLFWYNLHRSLDKDYRTKHAGCPVLK 500

  Fly   493 GSKRIGNIWMHSGYQEFRRPCNLTSDSYKSLAY 525
            |||.|||:|:|...|.|.|||::..|...||.|
  Fly   501 GSKWIGNVWIHEVTQTFARPCDVFRDHEVSLEY 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 44/140 (31%)
P4Hc 335..503 CDD:214780 81/172 (47%)
PH4alphaNE1NP_733374.1 P4Ha_N 26..155 CDD:285528 44/140 (31%)
P4Hc 341..511 CDD:214780 81/172 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461745
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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