DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and PH4alphaEFB

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:554 Identity:179/554 - (32%)
Similarity:280/554 - (50%) Gaps:54/554 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RHCLYIGIFQLIIWVGVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIK 68
            |..|.:||  |::..|.||||.|:::..|::|.:.|..|:.....|:..|:.:|:|.:..:::.:
  Fly     6 RLMLLLGI--LLLVGGPANGEVYTALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQ 68

  Fly    69 REHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGYPD 133
            |||..|:..:..  |:.:|::|:.|.|||..||..:  |.::.::...:|...:......|.:|.
  Fly    69 REHSDASHDITA--YVSNPINAYLLTKRLTTDWRQV--ENLMEHDVGTDFLQNITQYRSLLKFPS 129

  Fly   134 QSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQ 198
            ..:|.||...|.|||..|.|.||.:|.|.:.|:.|.:::...:|:|:|.|.:...:|..::.|:.
  Fly   130 DEDLNGAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMN 194

  Fly   199 VAFILLRNSPREEKDADHYLS----DIREYASMANFELGNPKKAARLLSQILESQPTHS------ 253
            .|...:...|     .:|..|    ||.||.:.:.::.||.:.|..:.:::|:..|.|.      
  Fly   195 EAMARMLEEP-----TNHTQSFTKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNK 254

  Fly   254 -------AQQ-----------TQKYLESRVPGKNVQETKPSWFS-----NYTRLCQGRRLPEERS 295
                   |||           |.:..:|.:|   |.::.|:.|.     .|..||:|...|....
  Fly   255 RFYEKEIAQQLQLRKMKGDDGTDEMPKSDLP---VAKSDPAIFDMTERRAYEMLCRGELKPSPSD 316

  Fly   296 GDPLRCYLDGKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGS- 359
            ...|||.....|..:..|.||::|.||.||.|.:||..:...:| .:.:...:....|:.|..| 
  Fly   317 LRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEI-DLIKRMARPRFRRATVQNSV 380

  Fly   360 GGEGTVRDLRVSQQTWL-DYKSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFE 423
            .|.....:.|:|:..|| ..:..|:.:|.:....::|.||..||.:||.|||:||.||||.|:..
  Fly   381 TGALETANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFAR 445

  Fly   424 VNLPKNFE----GDRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTL 484
            ....:.||    |:||:|.:||:|||||||.||||.|:..|.|.||....|.||||....|.||.
  Fly   446 KEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTR 510

  Fly   485 HAGCPVIVGSKRIGNIWMHSGYQEFRRPCNLTSD 518
            ||.|||:.|:|.:.|.|:|...|||||||:|..|
  Fly   511 HAACPVLTGTKWVSNKWIHERGQEFRRPCDLEED 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 38/134 (28%)
P4Hc 335..503 CDD:214780 69/173 (40%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 38/134 (28%)
P4Hc 356..529 CDD:214780 69/173 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461746
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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