DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and CG18233

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_649044.3 Gene:CG18233 / 40025 FlyBaseID:FBgn0036795 Length:515 Species:Drosophila melanogaster


Alignment Length:518 Identity:146/518 - (28%)
Similarity:255/518 - (49%) Gaps:60/518 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NGEFY-SSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKR-EHEWATSQLKLDDYL 84
            |.::| |||..:..|.::|:|.:.....|....|:::|....:::.:|| .|:....:.|   ::
  Fly    27 NRKYYSSSVLGLVKLLKMEQEFMVNFSIYANILQEKVDNLNIFLDALKRPNHKTHNEREK---FV 88

  Fly    85 GHPLHAFRLIKRLVRDWDSLIFEPILANNAR-----EEFRAFVEVLSRDLGYPDQSELQGAIKGL 144
            .:||:||.||:||.:||      |.|.|..:     |:..|..:::|   ..|:..::...:|.:
  Fly    89 SNPLNAFGLIRRLNQDW------PKLQNYTQKPLGLEQLTAMQDIVS---AAPESFDMNEKLKAM 144

  Fly   145 ARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQVAFILLRNSPR 209
            .|::..|:|...|:|.|::....:...|.:|:|..:....|::||::|||.|.|.|..|..:...
  Fly   145 HRIETTYDLQPKDIAKGLLQRTEFNYRLLFRDCLALAYHKFEIGEFKRSLLWFQEALKLSTDGSL 209

  Fly   210 EEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQP----THSAQQTQKY--LESRVPGK 268
            |      .::.::| ..:..|.....|::..|.:|.|.::.    .:|..|..|.  ||..:..:
  Fly   210 E------IMNRLKE-IELKGFATAVAKRSIYLSNQGLTNETIDDMANSQLQDAKLMDLEQLISSE 267

  Fly   269 -----NVQETKPSWFSNYTRLCQGRRLPEERSGDPLRCYLDGKRHAYFTLAPLQVEPVHLDPDIN 328
                 |...|.|.  :::...|:| ..|::.:   |.|..:...:|:..||||::|.:..||.|.
  Fly   268 LKQWINDDSTTPP--TDHNLGCRG-LFPKKSN---LVCRYNSSTNAFLKLAPLKMEEISRDPYIV 326

  Fly   329 VYHGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLR--VSQQTWLDYKSPVMNSVGRIIQ 391
            ::|.::|.|.|         |||.........|..::.|.:  ||:..|:..:|.....:.:.|.
  Fly   327 MFHEVISDKDI---------EEMKGEITEMENGWTSLGDPKEIVSRVYWIRKESSFSKRINQRIS 382

  Fly   392 FVSGFDMAGAEHMQVANYGVGGQYEPHPDYF-----EVNLPKNFEGDRISTSMFYLSDVEQGGYT 451
            .::||.:.....:|:||:||||.::||.|::     ||:: .|..||||.:.:||..:|.|||.|
  Fly   383 DMTGFKLEEFPAIQLANFGVGGYFKPHYDFYTDRLKEVDV-NNTLGDRIGSIIFYAGEVSQGGQT 446

  Fly   452 VFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRPCN 514
            ||..|.|.:.|.||..:.|.|.......|.|:||:.|||:|||:.....|:|...|.|.:||:
  Fly   447 VFPDLKVAVEPKKGNALFWFNAFDDSTPDPRSLHSVCPVLVGSRWTITKWLHYAPQLFVKPCS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433 36/142 (25%)
CpoB <178..263 CDD:441335 21/90 (23%)
P4Hc 335..503 CDD:214780 59/174 (34%)
CG18233NP_649044.3 P4Ha_N 34..164 CDD:462433 36/141 (26%)
P4Hc 333..498 CDD:214780 59/174 (34%)

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