DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and CG18234

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster


Alignment Length:516 Identity:130/516 - (25%)
Similarity:227/516 - (43%) Gaps:60/516 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWATSQLKLDDYLGHPLHAFR 92
            |:..|::|..:|...::...||..:.:.::|.....:::::.:.|  .|:...::::.|||:||.
  Fly    27 SIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQEVQSKRE--ISRRNPEEFVAHPLNAFS 89

  Fly    93 LIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGYPDQSELQGAIKGLARLQKVYNLATSD 157
            ||:||..||...  |.::.|....|....:|. ..:...|..::|..||.|:..||:.|||..||
  Fly    90 LIRRLHEDWTQA--ELLMLNQVGLEHLQAIET-GLEEAQPSDNDLNDAIGGIISLQQFYNLQPSD 151

  Fly   158 LADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQVAFILLRNSPREEKDADHYLSDIR 222
            :|:|::.|..|.:.|....|..:.....:....:.:|.|.:.|             .||| :|.|
  Fly   152 IANGLLMGQQYNASLTTLNCQALANACMNFNYDKYALNWFKAA-------------VDHY-NDDR 202

  Fly   223 E---YASMANFEL--------------GNPKKAARLLSQILESQPTHSAQQTQKYLESRVPGKNV 270
            :   |..:.:|.|              |..|.|.::|..:.:...|....:...|...::...:.
  Fly   203 DGQVYREVFDFRLPDLYINYTSVLVTKGFRKAAWKVLQDVADLDATLWLLRKDIYEVGKIDVPDP 267

  Fly   271 QETKPSWFSNYTRLCQGRRLPEERSGDPLRCYLDGKRHAYFTLAPLQVEPVHLDPDINVYHGMLS 335
            ......||.....|..|      ::...|.|:.:.....:..:|||:||.:.|.|.|.:||.::.
  Fly   268 TFIITPWFDVTGCLRVG------QTSQHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIY 326

  Fly   336 SKQILSI----FEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTWLDYKSPVMNSVGRIIQFVSGF 396
            ..:|..:    .........:..|:..:.....:|:         |::||    :...|:.::|.
  Fly   327 DSEISKVKNISLPSLKSPLRILYAIDYNLKFAKIRE---------DHQSP----LSLRIKDMTGE 378

  Fly   397 DMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFEGDRISTSMFYLSDVEQGGYTVFTKLNVFLP 461
            |:......|:.|||:.|....|.|..|:.......|||:::.||:::||.|||...|..||:.:.
  Fly   379 DVQEDTDFQIDNYGICGFRNFHTDNIELQDQTAELGDRLTSIMFFMNDVAQGGALAFPNLNLTIW 443

  Fly   462 PVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRPCNLTSDSYKS 522
            |.||:.::|.||...:..:...||..|||:||||.....|:|...|.|.|||. |...:||
  Fly   444 PQKGSALVWRNLDHRMQPNQDLLHVSCPVVVGSKWTLVKWLHERPQMFSRPCT-TGRKFKS 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 38/134 (28%)
P4Hc 335..503 CDD:214780 46/171 (27%)
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 38/134 (28%)
P4Hc <371..485 CDD:214780 40/113 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461931
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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