DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and CG4174

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001034031.2 Gene:CG4174 / 40023 FlyBaseID:FBgn0036793 Length:473 Species:Drosophila melanogaster


Alignment Length:522 Identity:123/522 - (23%)
Similarity:218/522 - (41%) Gaps:125/522 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWATSQLKLDDYLGHP- 87
            :|..|.:|...|.:::|..:|..:||.:..:|.|...||.:.|         |:..|......| 
  Fly    28 DFAISSESQLSLLKLKETHVNNLQSYKKVLKKHLQKIRRAIRQ---------SEELLKSTKTSPR 83

  Fly    88 --LHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLG-------------YPDQSEL 137
              ::.:::::.|..||..                 :..:|.:|||             .|...:.
  Fly    84 NLIYGYKVLRHLHNDWPQ-----------------YFRLLKKDLGLEQIAVSQMLLTQQPTSVDF 131

  Fly   138 QGAIKGLARLQKVYNLATSDLADGIIGG-----LNYGSDLRWRECYEIGVQLFDLGEYQRSLEWL 197
            :.::..:.|||.||||.:..:.:|.|..     .|:.:|    ||..:|:....|.:|.:|..||
  Fly   132 EESMGAMHRLQTVYNLDSYAMTEGFIDDKDKNIRNWSAD----ECLMLGLMYLFLKDYNQSENWL 192

  Fly   198 QVAF-------------ILLRNSPREEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQ 249
            ::|.             |.|.|.|           ::.|....||..||:..:|.:..:::|...
  Fly   193 ELALYHYDDNVSPEVLKIKLWNYP-----------NLLESLVEANKGLGHYFEAKKYANELLSIN 246

  Fly   250 PTHSAQQTQ----KYLESRVPGKNVQETKP-SWFSNYTRLCQGRRLPEERSGDPLRC-YLDGKRH 308
            |.|:...||    |:|:|. |.|   .||| ..|.....:|..|   ..|....|.| |:|..  
  Fly   247 PNHTYMLTQLPKLKHLQSN-PAK---LTKPKKVFQLQKEICSKR---YRRKSGVLVCRYVDWT-- 302

  Fly   309 AYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQ 373
            .:..||||::|.:.:.|.|::::|.|..|.| .:.:...:.::.|...........:.:|..|..
  Fly   303 PFLKLAPLKMEELSMKPYISIFYGFLGQKDI-EVLKNVSRPKLQRIEHLSGNCSCKIGNLSTSLH 366

  Fly   374 TWLDYKSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFEGDRI--- 435
                   .|:..|..:|..::||.:.|.:.::|.|||:.|.|.|             |..:|   
  Fly   367 -------DVVRKVNELILGITGFPLKGNQMLEVINYGIAGNYNP-------------EEPKIHNK 411

  Fly   436 STSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNI 500
            :.:..:||:..:||..||...::.:.|.||::::|.||.:||      ::..||::.     ||:
  Fly   412 ANAFIFLSNAGKGGEIVFPSRHLKVRPRKGSMLVWENLKKSL------IYHQCPILK-----GNM 465

  Fly   501 WM 502
            |:
  Fly   466 WV 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 31/150 (21%)
P4Hc 335..503 CDD:214780 39/171 (23%)
CG4174NP_001034031.2 P4Ha_N 33..157 CDD:285528 30/149 (20%)
TPR repeat 169..197 CDD:276809 10/31 (32%)
TPR repeat 202..245 CDD:276809 11/53 (21%)
2OG-FeII_Oxy <362..470 CDD:304390 35/137 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461859
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.000

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