DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and CG18749

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001027154.1 Gene:CG18749 / 3771984 FlyBaseID:FBgn0042182 Length:491 Species:Drosophila melanogaster


Alignment Length:524 Identity:138/524 - (26%)
Similarity:233/524 - (44%) Gaps:111/524 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 FYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWATSQLKLD--DYLGHP 87
            :.:|...:..|.:||:||::..:.||::.:.:.:...|.:..:.||:    .::|.|  .|||:|
  Fly    32 YAASTMELMKLLEVEDELVDNLKGYVKTLKMKFNLMERSLIDMSREN----MEMKSDYESYLGNP 92

  Fly    88 LHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGY-----------PDQSELQGAI 141
            |::||||.||...|             |:.::..::|.:..||:           |..|:||.|.
  Fly    93 LNSFRLIHRLHTSW-------------RKWYQYAIKVENNALGHIENARLMRKMLPTSSDLQQAC 144

  Fly   142 KGLARLQKVYNLATSDLADGIIGGLNY-GSDLRWRECY---EIGVQLFDLGEYQRSLEWLQVAFI 202
            :|:..|...|:|...:||.|.:.|.:. |:.|...:|.   |.|||                   
  Fly   145 RGIHDLMYFYDLKPEELAAGNLAGYSQPGTGLTAYDCLALGEFGVQ------------------- 190

  Fly   203 LLRNSPREEKDADHYLSDIRE---YASMANFELGNPKKAARLLSQILESQPTHSA---------Q 255
                   .:||      |:.|   ..|:..|:            .|:|....|.|         |
  Fly   191 -------NQKD------DLAEAWYNLSLTRFD------------NIIEKYQVHKAWALLLAKNKQ 230

  Fly   256 QTQ--KYLESRVPGKNVQETKPSWFSNYTRLCQGRRLPEERSGDPLRCYLDGKRHAYFTLAPLQV 318
            .|:  ::.|:: |...|...:...|.......|......::....|.|..:.....:..:|||::
  Fly   231 LTEAFQHFENK-PEGIVASNEVIHFEGVLATTQNCTAVVQKPSKKLHCRYNTSTTPFTRIAPLKM 294

  Fly   319 EPVHLDPDINVYHGMLSSKQILSIFEEAD--KEEMVRSAVAGSGGEGTVRDLRVSQQTWL-DYKS 380
            |.:.|||.:.|:|.::...:|..:...:|  ..|.|         .|...::|.|:.:.: |.| 
  Fly   295 EELGLDPYMVVFHDVIYDTEIDGMLNSSDFGLSESV---------SGLKSEVRTSKDSHIVDAK- 349

  Fly   381 PVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFE-VNLPKNFEGDRISTSMFYLSD 444
                ::...:..::|..|..::...:.|||:||.:..|.|:.| .|..:..:||||:|.:|||.:
  Fly   350 ----TLNERVTDMTGLSMEMSDPFSLINYGLGGHFILHHDFHEYTNTTRLKQGDRIATVLFYLRE 410

  Fly   445 VEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQEF 509
            |:.||.|||..||:.:.|.||:.|.|:|||.|..|:::|||..||||.|||.:...|::...|.|
  Fly   411 VDSGGATVFPMLNITVMPKKGSAVFWYNLHNSGAVNSKTLHTACPVISGSKYVLTKWINELPQMF 475

  Fly   510 RRPC 513
            ..||
  Fly   476 VTPC 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 41/147 (28%)
P4Hc 335..503 CDD:214780 57/171 (33%)
CG18749NP_001027154.1 P4Ha_N 35..166 CDD:285528 41/147 (28%)
P4Hc 314..468 CDD:214780 56/167 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461786
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.890

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