DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaSG2 and p4ha2

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_005173949.1 Gene:p4ha2 / 373132 ZFINID:ZDB-GENE-030827-1 Length:542 Species:Danio rerio


Alignment Length:531 Identity:166/531 - (31%)
Similarity:275/531 - (51%) Gaps:50/531 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWATSQLKLDDYLGHPL 88
            |.::|:..|.:|...|.||:.:.:.|:::::::|:..|.:..::.:....:||.  .:.:|.||:
Zfish    21 EIFTSIGQMTNLIFTERELVQSLKEYIQAEEQKLETVRSWANKLDKLTRTSTSD--PEGFLAHPV 83

  Fly    89 HAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGYPDQSELQGAIKGLARLQKVYNL 153
            :|::|:|||..:|..|  |.::..:..:.|.:.:.|..:  .:||:.:.:||.|.|.|||..|.|
Zfish    84 NAYKLMKRLNTEWSEL--ESLVLQDPSDGFISNMSVHRQ--YFPDEEDEKGAAKALLRLQDTYKL 144

  Fly   154 ATSDLADGIIGGLNYGSDLRWR------ECYEIGVQLFDLGEYQRSLEWLQVAFILLRNSPREEK 212
            .....:.|.:.|....|.:|:.      :|:::|...::..:|..|:.|:|.:   ||.....| 
Zfish   145 DAESFSKGKLPGQRQHSGVRYNALLTVDDCFDMGKMAYNDNDYYHSVLWMQQS---LRQMDSGE- 205

  Fly   213 DADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTHS-AQQTQKYLESRVPGKNVQET--- 273
            :|....:|:.:|.|.:.:::|:..:|..|..::|...|:|. |....:|.| |:..|.:|::   
Zfish   206 EAKTPKADVLDYLSYSVYQMGDLPRAIELTRRLLAIDPSHQRAGGNLRYFE-RLLSKELQDSGQT 269

  Fly   274 -------KPSWFSNYTR-------------LCQGR--RLPEERSGDPLRCYLDGKRHAYFTLAPL 316
                   :|.....|.|             ||:|.  ::..:|.......|.||.|:....|.|:
Zfish   270 QPEPADERPIQLDTYQRPKDYLPEREAYEALCRGEGVKMTTKRQSRLFCRYRDGNRNPRLLLKPM 334

  Fly   317 QVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAG-SGGEGTVRDLRVSQQTWLDYK- 379
            :.|.....|.|..:...||.::|..| :|....::.|:.|.. ..|..||...|||:..||:.: 
Zfish   335 KEEDEWDSPHIVRFLEALSDEEIQKI-KEIATPKLARATVRDPKTGVLTVAHYRVSKSAWLEGED 398

  Fly   380 SPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE----GDRISTSMF 440
            .||:..|.:.|:.::|..:..||.:||||||||||||||.|:...:.|..|:    |:|::|.:.
Zfish   399 DPVIARVNQRIEDITGLTVDTAELLQVANYGVGGQYEPHFDFSRKDEPDAFKSLGTGNRVATYLN 463

  Fly   441 YLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSG 505
            |:||||.||.|||......:.|.||..|.|:||.||...|.||.||.|||:||||.:.|.|:|..
Zfish   464 YMSDVEAGGATVFPDFGASVWPRKGTAVFWYNLFRSGEGDYRTRHAACPVLVGSKWVSNKWIHER 528

  Fly   506 YQEFRRPCNLT 516
            .|||||||.||
Zfish   529 GQEFRRPCGLT 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 36/134 (27%)
P4Hc 335..503 CDD:214780 74/173 (43%)
p4ha2XP_005173949.1 P4Ha_N 25..154 CDD:285528 36/134 (27%)
P4Hc 353..526 CDD:214780 74/173 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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