DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and P4ha2

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001101745.1 Gene:P4ha2 / 360526 RGDID:1309673 Length:535 Species:Rattus norvegicus


Alignment Length:540 Identity:172/540 - (31%)
Similarity:268/540 - (49%) Gaps:53/540 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LIIWVGV---ANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWAT 75
            |:.|.||   ...||::|:..|.||...|::|:.:.:.|:.:::.:|...:.:..::    |..|
  Rat     9 LMSWFGVLSWVQAEFFTSIGHMTDLIYAEKDLVQSLKEYILAEEAKLSKIKSWASKM----EALT 69

  Fly    76 SQLKLD--DYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGYPDQSELQ 138
            |:...|  .||.||::|::|:|||..||.:|  ..::..:|...|.|.:.| .|.. :|...:..
  Rat    70 SKSAADPEGYLAHPVNAYKLVKRLNTDWPAL--GDLVLQDAAAGFVANLSV-QRQF-FPTDEDES 130

  Fly   139 GAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQVAFIL 203
            ||.:.|.|||..|.|....::.|.:.|..|.:.|...:|:.:|...::.|:|..::.|::.  :|
  Rat   131 GAARALMRLQDTYKLDPDMISRGELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQ--VL 193

  Fly   204 LRNSPREEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTHS--------------- 253
            .:....||......|  :.:|.|.|.|:||:..:|..|..::|...|:|.               
  Rat   194 KQLDAGEEATVTKSL--VLDYLSYAVFQLGDLHRAVELTRRLLSLDPSHERAGGNLRYFERLLEE 256

  Fly   254 ------AQQTQKYLESRVPGKNVQETKPSWFSN---YTRLCQGRRLP-EERSGDPLRC-YLDGKR 307
                  :.||...|.|:   :|:.|....:...   |..||:|..:. ..|....|.| |..|.|
  Rat   257 ERGKSLSNQTDAGLASQ---ENLYERPVDYLPERDVYESLCRGEGIKMTPRRQKRLFCRYHHGNR 318

  Fly   308 HAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAG-SGGEGTVRDLRVS 371
            .....:||.:.|.....|.|..|:.::|.::|..| :|..|.::.|:.|.. ..|..||...|||
  Rat   319 VPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERI-KEIAKPKLARATVRDPKTGVLTVASYRVS 382

  Fly   372 QQTWLDY-KSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE---- 431
            :.:||:. ..||:..|.|.:|.::|..:..||.:||||||:|||||||.|:...:....|:    
  Rat   383 KSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDERDAFKRLGT 447

  Fly   432 GDRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKR 496
            |:|::|.:.|:||||.||.|||..|...:.|.||..|.|:||.||...|.||.||.|||:||.|.
  Rat   448 GNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 512

  Fly   497 IGNIWMHSGYQEFRRPCNLT 516
            :.|.|.|...|||.|||..|
  Rat   513 VSNKWFHERGQEFLRPCGTT 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433 39/138 (28%)
CpoB <178..263 CDD:441335 22/105 (21%)
P4Hc 335..503 CDD:214780 74/173 (43%)
P4ha2NP_001101745.1 P4Ha_N 26..157 CDD:462433 39/138 (28%)
P4Hc 346..519 CDD:214780 74/173 (43%)

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