DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and PH4alphaNE3

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_651814.1 Gene:PH4alphaNE3 / 326114 FlyBaseID:FBgn0051017 Length:481 Species:Drosophila melanogaster


Alignment Length:120 Identity:28/120 - (23%)
Similarity:50/120 - (41%) Gaps:34/120 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 KLAGLLALKNKNNRILFH----------ASMRNSWNLIQNNEYLLSRLYEEKEIFPQVLGTCGEL 222
            |..|.:..:.|   :|.|          :|.:||:| .|..:.|...|:|:..||.:::|     
  Fly   595 KFEGKITTQGK---LLLHGPLYCVEGASSSDKNSYN-SQKPKELHVFLFEQNIIFAEIVG----- 650

  Fly   223 FLTELLETVEFVDEGRYHFTNHIDLSKWRYHLKVAVLVLDYLDEMGQNRFQMCSV 277
                  :..:|... .|.:..||.::|        :.:.|..|:...|||.:||:
  Fly   651 ------KKTQFTSP-NYIYKAHIQVNK--------MTLQDLSDQTNGNRFSLCSI 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433
CpoB <178..263 CDD:441335 19/94 (20%)
P4Hc 335..503 CDD:214780
PH4alphaNE3NP_651814.1 P4Ha_N 25..150 CDD:462433
P4Hc 316..478 CDD:214780
Blue background indicates that the domain is not in the aligned region.

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