DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaSG2 and CG31016

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_733393.3 Gene:CG31016 / 326113 FlyBaseID:FBgn0051016 Length:536 Species:Drosophila melanogaster


Alignment Length:538 Identity:157/538 - (29%)
Similarity:259/538 - (48%) Gaps:51/538 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LYIGIFQLII-WVGVANG-----EFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVE 65
            |:...|.|:: |  :|.|     .:..||:...||.:.:.||:....||.....:::...:|.|:
  Fly     6 LFAVSFILVLSW--IAEGYRDRQNYVISVEEKMDLLEKDRELIIVLDSYATELNEKIIMLKRIVK 68

  Fly    66 QIKREHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLG 130
            :.|:..|.|.:  :.::||.:|:.:..|::::..||:.:  |.:|.....:|..|.||.:..|| 
  Fly    69 EFKQPLEKAKN--REEEYLSNPIDSLSLMRQMHEDWEKV--EKLLKKPVGQEKIALVEKMREDL- 128

  Fly   131 YPDQSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLE 195
             |.:::|..|.:.:.|:...|:|...|::.|.|.|:.||..:...:|:.:|...|..|.||.:.:
  Fly   129 -PVENDLMEANQAMFRILHTYDLEPKDVSAGWIDGVQYGGKMSASDCFTMGTFSFMAGSYQIASK 192

  Fly   196 WLQVAFILLRNSPREEKDADHYL-SDIREYASMANFELGNPKKAARLLSQILESQPTHSAQQTQK 259
            ||..|..||.:.||:..:..... :|:....:.:....||...|..:|.:........|| .|..
  Fly   193 WLSAAKDLLVDQPRKYHEVMGITKADVTLLLARSLIASGNVSIATDMLMRDFMFGEAGSA-LTVH 256

  Fly   260 YLESR-VPGKNVQETKPSWFS--NYTRLCQ--GRRLPEERSGDPLRCYLDGKRHAYFTLAPLQVE 319
            :|.:: .|..|::    ||.|  ::.:||:  .||...|.....|.|..:.....:..|||.::|
  Fly   257 FLRNKPKPSINLE----SWESDESFNQLCRSSSRRQMGESKPSRLHCRYNTITTPFLKLAPFRME 317

  Fly   320 PVHLDPDINVYHGMLSSKQILSI------FEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTWLDY 378
            .:.|||.:..||.:||..:|..:      |.|..|...|..      |...:...|.:...||.:
  Fly   318 ELSLDPYVIFYHNVLSDAEIEKLKPMGKPFLERAKVFRVEK------GSDEIDPSRSADGAWLPH 376

  Fly   379 KS------PVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE----GD 433
            ::      .|:|.:||.|:.::|.:......||...||.||.:.||.|||.   .|.|.    ||
  Fly   377 QNIDPDDLEVLNRIGRRIEDMTGLNTRSGSKMQFLKYGFGGHFVPHYDYFN---SKTFSLETVGD 438

  Fly   434 RISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHR-SLHVDARTLHAGCPVIVGSKRI 497
            ||:|.:|||::|:.||.|||.|||:.:|..||:.:.|||:.| |...|.||.|..||:|.|:|.:
  Fly   439 RIATVLFYLNNVDHGGATVFPKLNLAVPTQKGSALFWHNIDRKSYDYDTRTFHGACPLISGTKLV 503

  Fly   498 GNIWMHSGYQEFRRPCNL 515
            ...|::...|.|..|..|
  Fly   504 MTRWIYELDQMFLIPAVL 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433 36/136 (26%)
CpoB <178..263 CDD:441335 21/85 (25%)
P4Hc 335..503 CDD:214780 64/184 (35%)
CG31016NP_733393.3 P4Ha_N 31..162 CDD:462433 36/136 (26%)
P4Hc 333..508 CDD:214780 63/183 (34%)

Return to query results.
Submit another query.