DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and PH4alphaSG1

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_733376.1 Gene:PH4alphaSG1 / 326112 FlyBaseID:FBgn0051014 Length:540 Species:Drosophila melanogaster


Alignment Length:551 Identity:197/551 - (35%)
Similarity:298/551 - (54%) Gaps:47/551 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IGIFQLIIWVGVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEW 73
            :.|...::.|...||::||::..::.|..||..::.....|:|..|::.:..:|:::||   .|.
  Fly     4 LSIILSLLCVFPVNGDYYSAISELERLLDVEAFIVEKFDEYLERAQQEQENLKRFLDQI---DEQ 65

  Fly    74 ATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGY-----PD 133
            ...:..|::|.|:|::||..|||||.||...:|:|:..::   .|..:...||..|..     |.
  Fly    66 QNDRGDLEEYFGNPINAFITIKRLVHDWKFNVFDPVFDSS---NFETYKNNLSDSLEKINFKGPT 127

  Fly   134 QSELQGAIKGLARLQKVYNLATSDLADGII--GGLN-YGSDLRWRECYEIGVQLFDLGEYQRSLE 195
            |.:|.||.:.|.|||.:|.|.|..||.|::  |..| .|:.|...:|:|:|..|.::.||....|
  Fly   128 QEDLHGATRALLRLQNMYQLNTDHLASGVLHPGEKNALGTSLSASDCFELGKNLCEIKEYSYGSE 192

  Fly   196 WLQVAFILLRNSPREEKDADHYLS------DIREYASMANFELGNPKKAARLLSQILESQPTHSA 254
            ||..|...|...|.      .::|      :|.|:.|.|...|||.|.|.:|.::||:.:|.|..
  Fly   193 WLLEARKRLHGKPL------GFISPNVSDVEILEHLSSAFNGLGNLKLAYKLNNEILDKKPDHEE 251

  Fly   255 QQTQKYL--------ESRVPGKNVQ-------ETKPSWFSNYTRLCQGRRLPEERSGDPLRCYLD 304
            ....|.|        .|..|.|.|:       |.|.| :..||::|:|......|....|||:|.
  Fly   252 ALKNKILYEGQLARERSFAPRKQVELPQIAEKEQKES-YKLYTQVCRGELHQSPREQRNLRCWLY 315

  Fly   305 GKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLR 369
            .:...|:.|:|.::|.:::||.:...|.:|...:|.:|.|.. |..|.||.| |.....|..::|
  Fly   316 HQGVPYYRLSPFKIEQLNVDPYVAYVHEVLWDSEIDTIMEHG-KGNMERSKV-GQSENSTTSEVR 378

  Fly   370 VSQQTWLDY-KSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNF--E 431
            :|:.|||.| .:|.::.:.:.::.|:|.....||.:|:.|||:|||||||.|:.|.:....|  :
  Fly   379 ISRNTWLWYDANPWLSKIKQRLEDVTGLSTESAEPLQLVNYGIGGQYEPHFDFVEDDGQSVFSWK 443

  Fly   432 GDRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKR 496
            |:|:.|::|||:||..||.|.|..|.:.:|||||:|::|:|||.|.|.|.||.||||||:.|||.
  Fly   444 GNRLLTALFYLNDVALGGATAFPFLRLAVPPVKGSLLIWYNLHSSTHKDFRTKHAGCPVLQGSKW 508

  Fly   497 IGNIWMHSGYQEFRRPCNLTSDSYKSLAYRD 527
            |.|.|.|.|.|||||||.|:||..|.|..:|
  Fly   509 ICNEWFHVGAQEFRRPCGLSSDEGKFLHLKD 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 44/139 (32%)
P4Hc 335..503 CDD:214780 75/170 (44%)
PH4alphaSG1NP_733376.1 P4Ha_N 23..157 CDD:285528 44/139 (32%)
P4Hc 347..515 CDD:214780 75/169 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461952
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 1 0.950 - 0 Normalized mean entropy S4458
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.850

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