DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and P4ha3

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_006508007.1 Gene:P4ha3 / 320452 MGIID:2444049 Length:551 Species:Mus musculus


Alignment Length:535 Identity:175/535 - (32%)
Similarity:258/535 - (48%) Gaps:63/535 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWATSQLKLDDYLGHPLHA 90
            :|::.|:......|..||...|.|:..::.:|....|:.:::...||    .||:.  :.:||.|
Mouse    29 FSALTSVARALAPERRLLGTLRRYLRGEEARLRDLTRFYDKVLSLHE----DLKIP--VVNPLLA 87

  Fly    91 FRLIKRLVRDWDSLIFEPILANNAREEFRAF---VEVLSRDLGYPDQSELQGAIKGLARLQKVYN 152
            |.|||||..||.:::.    :..|.|..||.   .|.:.:||  |...:|:||.:.|.|||.||.
Mouse    88 FTLIKRLQSDWRNVVH----SLEATENIRALKDGYEKVEQDL--PAFEDLEGAARALMRLQDVYM 146

  Fly   153 LATSDLADGIIGGLNYGS-----------DLRWRECYEIG--------VQL-FDLGEYQRSLEWL 197
            |....||.|:...:...|           .|...:|:::|        :|: :|.|:|..::.||
Mouse   147 LNVKGLARGVFQRVTGSSITDLYSPRQLFSLTADDCFQVGKPSCGSRSLQVAYDTGDYYHAIPWL 211

  Fly   198 QVAFILLRNSPREEKDADH-YLSDIREYASMANFELGNPKKAARLLSQILESQPTHS--AQQTQK 259
            :.|..|.|.:..|.|..|. .|.|..:|.:.|.|::||...|..|..:.|...|.:.  |:...|
Mouse   212 EEAVSLFRRAHGEWKTEDEASLEDALDYLAFACFQVGNVSCALSLSREFLVYSPDNKRMARNVLK 276

  Fly   260 Y------------LESRVPGKNVQETKPSWFSNYTRLCQ--GRRLPEERSGDPLRCYLDGKRHAY 310
            |            .|:.:...||...:..  ..|..|||  |.: |.......|.|..:.....|
Mouse   277 YERLLAENGHQMAAETAIQRPNVPHLQTR--DTYEGLCQTLGSQ-PTHYQIPSLYCSYETNSSPY 338

  Fly   311 FTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTW 375
            ..|.|.:.|.|||.|.|.:||..:|.::...|.|.|  |..::.:|..||.:....:.|:|:..|
Mouse   339 LLLQPARKEVVHLRPLIALYHDFVSDEEAQKIRELA--EPWLQRSVVASGEKQLQVEYRISKSAW 401

  Fly   376 L-DYKSPVMNSVGRIIQFVSGFDMAG--AEHMQVANYGVGGQYEPHPDYF---EVNLPKNFEGDR 434
            | |...|::.::...|..::|.|:..  ||::||.|||:||.||||.|:.   ...|.:...|:|
Mouse   402 LKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNR 466

  Fly   435 ISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGN 499
            ::|.|.|||.||.||.|.|...|..:|.||.|.:.|.|||||...|..||||||||:||.|.:.|
Mouse   467 VATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVAN 531

  Fly   500 IWMHSGYQEFRRPCN 514
            .|:|...|||||||:
Mouse   532 KWIHEYGQEFRRPCS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 44/137 (32%)
P4Hc 335..503 CDD:214780 70/173 (40%)
P4ha3XP_006508007.1 P4Ha_N 31..157 CDD:369820 44/137 (32%)
P4Hc 363..535 CDD:214780 70/173 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839340
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4458
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.790

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