DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and phy-4

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001123049.1 Gene:phy-4 / 189869 WormBaseID:WBGene00012815 Length:282 Species:Caenorhabditis elegans


Alignment Length:227 Identity:63/227 - (27%)
Similarity:110/227 - (48%) Gaps:19/227 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 GRRLPEERSGD-PLRCYLDGKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEE 350
            |:.|..:.|.| .|.||   :.|.:..:.  :||.:..:|.|..||..:..:......:||:...
 Worm    37 GKELRGDSSRDGRLVCY---RLHKHLLIR--KVEILSSEPFILQYHNQVHRRLAKRAVQEAEALR 96

  Fly   351 MVRSAVAGSGGEGTVRDLRVSQQTWLDYKSPVMNSVGRIIQ----FVSGFDMAGAEHMQVANYGV 411
            :.:..::|.........:|.:..|||.:..  ..|..||.:    .::..|::.||..|:.:|..
 Worm    97 LEQLKISGFTTTPEKSQVRAANGTWLIHTG--RPSFARIFEGLQANINSLDLSTAEPWQILSYNA 159

  Fly   412 GGQYEPHPDYFEVNLPKNFE-----GDRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWH 471
            .|.|.||.||  :|...|.:     |:||:|.:..|...::||.|||.:||:.:.|..|.:::|.
 Worm   160 DGYYAPHYDY--LNPATNVQLVEGRGNRIATVLVILQIAKKGGTTVFPRLNLNIRPKAGDVIVWL 222

  Fly   472 NLHRSLHVDARTLHAGCPVIVGSKRIGNIWMH 503
            |...:...:::||||.||:..|:|....:|:|
 Worm   223 NTLSTGESNSQTLHAACPIHEGTKIGATLWVH 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433
CpoB <178..263 CDD:441335
P4Hc 335..503 CDD:214780 48/176 (27%)
phy-4NP_001123049.1 P4Hc 81..254 CDD:214780 48/176 (27%)
Blue background indicates that the domain is not in the aligned region.

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