DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and phy-3

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_507251.2 Gene:phy-3 / 188624 WormBaseID:WBGene00004026 Length:318 Species:Caenorhabditis elegans


Alignment Length:244 Identity:58/244 - (23%)
Similarity:103/244 - (42%) Gaps:30/244 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   277 WFSNYTRLCQGRRLPEERSGDPLRC--YLDGKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQ- 338
            |.::...||.......:...:...|  |:       :.:.|:.:|.:...|.:.:|..::|.:| 
 Worm    49 WSTDQLELCDDETKDTKWQKNDSICITYV-------YNMLPVDMEIISWAPTLVIYRNLMSPRQT 106

  Fly   339 --ILSIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTWLDYKSPVMNSVGRIIQF-----VSGF 396
              .|:..|:.|. |:.:::..|:..|.|.|....|      :..|..::|...|:.     :.|.
 Worm   107 ASFLNFIEQRDL-EIQKTSDFGTSIETTHRRANGS------FIPPEDSNVTVEIKMQAQKRIPGL 164

  Fly   397 DMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE------GDRISTSMFYLSDVEQGGYTVFTK 455
            ::..|||....:|..||.|..|.||.:....::::      |:||.|.:|.|...|:||.|||..
 Worm   165 NLTVAEHFSALSYLPGGHYAVHYDYLDYRSKQDYDWWMNKTGNRIGTLIFVLKPAEKGGGTVFPS 229

  Fly   456 LNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHS 504
            :...:....|....|.|.......:..:.|.|||:..|.|.|..||:.:
 Worm   230 IGSTVRANAGDAFFWFNAQADEEKEMLSNHGGCPIYEGRKVIATIWIRA 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433
CpoB <178..263 CDD:441335
P4Hc 335..503 CDD:214780 49/181 (27%)
phy-3NP_507251.2 P4Hc 102..277 CDD:214780 49/181 (27%)
Blue background indicates that the domain is not in the aligned region.

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