DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and P4ha1

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001303300.1 Gene:P4ha1 / 18451 MGIID:97463 Length:534 Species:Mus musculus


Alignment Length:543 Identity:174/543 - (32%)
Similarity:276/543 - (50%) Gaps:53/543 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IIWV----------GVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKR 69
            :|||          .:|:..|::|:..|.||...|::|:.:.:.|:::::.:|:..:::.|::.|
Mouse     1 MIWVVLMMAILLPQSLAHPGFFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDR 65

  Fly    70 EHEWATSQLKLDDYLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGY-PD 133
            ....||..  .:.::|||::||:|:|||..:|..|  |.::..:..:   .|:..|:....| |:
Mouse    66 LTSTATKD--PEGFVGHPVNAFKLMKRLNTEWSEL--ENLILKDMSD---GFISNLTIQRQYFPN 123

  Fly   134 QSELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQ 198
            ..:..||.|.|.|||..|||.|:.::.|.:.|:.:.|.|...:|:|:|...:...:|..:..|::
Mouse   124 DEDQVGAAKALFRLQDTYNLDTNTISKGNLPGVQHKSFLTAEDCFELGKVAYTEADYYHTELWME 188

  Fly   199 VAFILLRNSPREEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTHSAQQTQ----K 259
            .|...|........|.    ..:.:|.|.|.::.|:..||..|..::||..|.|......    :
Mouse   189 QALTQLEEGELSTVDK----VSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLVYFE 249

  Fly   260 YLESRVPGKNV--------QETKPS----------WFSNYTRLCQGRRLP-EERSGDPLRC-YLD 304
            |:.|:....|.        |:|.|.          ....|..||:|..:. ..|....|.| |.|
Mouse   250 YIMSKEKDANKSASGDQSDQKTAPKKKGIAVDYLPERQKYEMLCRGEGIKMTPRRQKRLFCRYHD 314

  Fly   305 GKRHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAG-SGGEGTVRDL 368
            |.|:..|.|||.:.|.....|.|..:|.::|..:| .|.::..|..:.|:.|.. ..|:.|....
Mouse   315 GNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEI-EIVKDLAKPRLSRATVHDPETGKLTTAQY 378

  Fly   369 RVSQQTWLD-YKSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE- 431
            |||:..||. |:.||::.:...||.::|.|::.||.:||||||||||||||.|:...:.|..|. 
Mouse   379 RVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRE 443

  Fly   432 ---GDRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVG 493
               |:||:|.:||:|||..||.|||.::...:.|.||..|.|:||..|...|..|.||.|||:||
Mouse   444 LGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVG 508

  Fly   494 SKRIGNIWMHSGYQEFRRPCNLT 516
            :|.:.|.|:|...|||||||.|:
Mouse   509 NKWVSNKWLHERGQEFRRPCTLS 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 40/135 (30%)
P4Hc 335..503 CDD:214780 73/173 (42%)
P4ha1NP_001303300.1 P4Ha_N 24..153 CDD:285528 40/135 (30%)
TPR 205..238 10/32 (31%)
P4Hc 345..518 CDD:214780 73/173 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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