DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and dpy-18

DIOPT Version :10

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_499464.1 Gene:dpy-18 / 176569 WormBaseID:WBGene00001077 Length:559 Species:Caenorhabditis elegans


Alignment Length:533 Identity:155/533 - (29%)
Similarity:267/533 - (50%) Gaps:43/533 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VGVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEWATSQLKLDD 82
            :|.|..:.::|:..||:|.:.|..:......|:..::::|...::..|:..:::|.:......| 
 Worm    11 IGYAVADLFTSIADMQNLLETERNIPKILDKYIHDEEERLVQLKKLSEEYSKKNEISIENGLKD- 74

  Fly    83 YLGHPLHAFRLIKRLVRDWDSLIFEPILANNAREEFRAFVEVLSRDLGYPDQSELQGAIKGLARL 147
             :.:|::||.||||.:.||.. |...:.||.|.....:..:. |..:.||...:|.||..||.||
 Worm    75 -ITNPINAFLLIKRKIFDWKE-IESKMNANKAGNVVSSITDD-SYGVRYPTADDLSGAAIGLLRL 136

  Fly   148 QKVYNLATSDLADGII----GGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQVAFILLRNSP 208
            |..|.|.|.|||||.|    |...:.:    ::|:||....::..::..::.|::.|    :...
 Worm   137 QDTYRLDTKDLADGKIYADQGNYTFSA----KDCFEIARAAYNEHDFYHTVMWMEEA----QRRL 193

  Fly   209 REEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTH-SAQQTQKYLESRVPGKNV-- 270
            .:|.:....:.||.||.:.|.::..|.|.|.:|..::.:..||| .|:...|:.|..:..:.|  
 Worm   194 GDEVEPTVEVEDILEYLAFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEGVRR 258

  Fly   271 ----------QETKP-SWFSN-----YTRLCQGRRLPEERSGDPLRCYLDGKRHAYFTLAPLQVE 319
                      |..:| |...|     |..||:......::....|.||....| .:...||::||
 Worm   259 SDMRKNLPPIQNRRPDSVLGNTERTMYEALCRNEVPVSQKDISRLYCYYKRDR-PFLVYAPIKVE 322

  Fly   320 PVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGS-GGEGTVRDLRVSQQTWL-DYKSPV 382
            ....:|...::..::|..::.:| :|..|.::.|:.|..| .|:......|:|:..|| :::..|
 Worm   323 IKRFNPLAVLFKDVISDDEVAAI-QELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDV 386

  Fly   383 MNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE----GDRISTSMFYLS 443
            :.:|.:.|.:::..:|..||.:|:||||:||.|:||.|:.:....|:||    |:||:|.:||:|
 Worm   387 VETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMS 451

  Fly   444 DVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQE 508
            ....||.||||:....:.|.|...:.|:||::....:..|.||.|||:||.|.:.|.|:|....|
 Worm   452 QPSHGGGTVFTEAKSTILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEKGNE 516

  Fly   509 FRRPCNLTSDSYK 521
            |||||.|.|..|:
 Worm   517 FRRPCGLKSSDYE 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..165 CDD:462433 43/140 (31%)
CpoB <178..263 CDD:441335 19/85 (22%)
P4Hc 335..503 CDD:214780 61/173 (35%)
dpy-18NP_499464.1 P4Ha_N 21..152 CDD:462433 42/134 (31%)
NrfG 150..>240 CDD:443378 21/97 (22%)
P4Hc 338..511 CDD:214780 61/173 (35%)

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