DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and LOC110438585

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_021326960.1 Gene:LOC110438585 / 110438585 -ID:- Length:441 Species:Danio rerio


Alignment Length:445 Identity:141/445 - (31%)
Similarity:221/445 - (49%) Gaps:40/445 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 DDYLGHPLHAFRLIKRLVRDWDSLI--FEPILANNAREEFRAFVEVLSRDLGYPDQSELQGAIKG 143
            ::.|..|:.|::|:.||..:...:|  .:.|:..:..:||:   :.|...| .|...:|.||..|
Zfish    23 EENLRDPVAAYKLLCRLREELIYIIETIQSIIDVSQCDEFQ---DELKTTL-IPQYEDLDGAASG 83

  Fly   144 LARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQVAFI-LLRNS 207
            |.|||::|.|...|:..        .:.|...|.:.:|...:...::|.:..|...:.| ...||
Zfish    84 LIRLQEIYKLYPEDITK--------ETSLDADEAFHVGRVAYKEYKFQHAFLWFSYSGIRWTENS 140

  Fly   208 PREEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTHSAQQTQ--KYLE-SRVPGKN 269
            ...|||..||||     .|..:|  |:...|.....::|...|..:..:.|  :.|. .:.|..|
Zfish   141 STNEKDLLHYLS-----LSAKHF--GSLPWAIYYSQELLYLNPYDNEVKLQLNRLLHFQKSPNPN 198

  Fly   270 VQETKPSWFSNYTRLCQGRRLPEERSGD---PLRC-YLDGKRHAYFTLAPLQVEPVHLDPDINVY 330
            :... .|..|||..||:|.  .:||:..   .|.| |.....:.....||::.|.:..:|.|..:
Zfish   199 IFRL-DSLSSNYEALCRGE--VDERTSKRQRALSCRYSTSGGNPRLMYAPVKEEELWDEPKIIRF 260

  Fly   331 HGMLSSKQILSIFEEADKEEMVRSAVAGSGGEGTVRDLRVSQQTWLDYKSPVMNSVGRIIQFVSG 395
            |.::|..:|.:: ::..:.::.||.|. ..|:|.:...||||..:||...||...|.:.|:.|:|
Zfish   261 HDVISDTEIETL-KDIARPQLSRSGVY-QDGQGKISKHRVSQSVFLDDDDPVDAHVSQRIEDVTG 323

  Fly   396 FDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFEGDRISTSMFYLSDVEQGGYTVFTKLNVFL 460
            ..|..||.:.|.|||:||::|||.|..      ..|.|||:|.:.|:||||:||.|||.|:.:.:
Zfish   324 LSMEKAEPLLVQNYGIGGRFEPHIDAL------GEENDRIATFLIYMSDVEEGGATVFIKVGIAV 382

  Fly   461 PPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRPCNL 515
            .|.||:.|.|:||.::...|..|.||||||:.|:|.:.|.|:....|.|||||:|
Zfish   383 KPEKGSAVFWYNLQKNGESDFNTKHAGCPVLQGNKWVANKWIAEFGQVFRRPCSL 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 24/83 (29%)
P4Hc 335..503 CDD:214780 67/167 (40%)
LOC110438585XP_021326960.1 P4Ha_N <19..100 CDD:311993 24/80 (30%)
P4Hc 265..424 CDD:214780 66/166 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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