DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and LOC100492280

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_031761347.1 Gene:LOC100492280 / 100492280 -ID:- Length:552 Species:Xenopus tropicalis


Alignment Length:563 Identity:174/563 - (30%)
Similarity:284/563 - (50%) Gaps:78/563 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IGIFQLIIWVGVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEW 73
            :|:|      ..|:.:|::|:..|.||...|::|:.:.:.|:::::::|...:::.:  |.:|..
 Frog    10 LGLF------SCAHADFFTSIGHMTDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWAD--KLDHLT 66

  Fly    74 ATSQLKLDDYLGHPLHAFRLIKRLVRDW---DSLIFEPILANNAREEFRAFVEVLSRDLGY-PDQ 134
            .|:....:.:||||::||:|:|||..:|   ::||.:.|        ...|:..|:....| |:.
 Frog    67 DTATKDPEGFLGHPVNAFKLMKRLNTEWVKLENLILKDI--------SDGFISNLTIQRQYFPND 123

  Fly   135 SELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQV 199
            .:..||.|.|.|||..|||.|..::.|.:.|:.:.:.|...:|:::|...:...:|..:..|::.
 Frog   124 EDQTGAAKALLRLQDTYNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQ 188

  Fly   200 AFILLRNSPREEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTHSAQQTQ----KY 260
            |  |.:....||...|..:  :.:|.|.|.::.|:..||..|...:||..|.|......    :|
 Frog   189 A--LSQLDAGEESSLDKVM--VLDYLSYAVYQQGDLDKALTLTKLLLELDPEHQRGNGNLRYFEY 249

  Fly   261 LESRVPGKNVQETKPSWFS-----------------NYTRLCQGRRLP-EERSGDPLRC-YLDGK 306
            :.|:...|:  .:.||..:                 .|.:||:|..:. ..|....|.| |.||.
 Frog   250 IMSKESNKS--SSSPSEGAELGTRKGRPKDHLPERQKYEKLCRGEGVKMTSRRQKRLFCRYFDGN 312

  Fly   307 RHAYFTLAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAG------------- 358
            :.....|:|.:.|.....|.|..||.::|.::|..: :|..|..:.|:.::.             
 Frog   313 KDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKV-KELAKPRLRRATISNPITGVLETAQYRI 376

  Fly   359 SGGEGTVRD----------LRVSQQTWLD-YKSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVG 412
            |....||.|          .|||:..||. |:.||:..:.|.|:.|:|.||:.||.:||||||:|
 Frog   377 SKRRATVHDPQTGKLTTAQYRVSKSAWLSAYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGMG 441

  Fly   413 GQYEPHPDYFEVNLPKNFE----GDRISTSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNL 473
            ||||||.|:...:.|..|:    |:|::|.:||:||||.||.|||.::...:.|.||..|.|:||
 Frog   442 GQYEPHFDFARKDEPDAFKELGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNL 506

  Fly   474 HRSLHVDARTLHAGCPVIVGSKRIGNIWMHSGYQEFRRPCNLT 516
            ..|...|..|.||.|||:||:|.:.|.|:|...|||||||||:
 Frog   507 FESGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPCNLS 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 41/138 (30%)
P4Hc 335..503 CDD:214780 75/195 (38%)
LOC100492280XP_031761347.1 P4Ha_N 24..111 CDD:400573 25/96 (26%)
P4Hc 341..536 CDD:214780 75/195 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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