DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaSG2 and p4ha1

DIOPT Version :9

Sequence 1:NP_651801.1 Gene:PH4alphaSG2 / 43623 FlyBaseID:FBgn0039779 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:535 Identity:171/535 - (31%)
Similarity:281/535 - (52%) Gaps:48/535 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IGIFQLIIWVGVANGEFYSSVDSMQDLAQVEEELLNATRSYVESQQKQLDFYRRYVEQIKREHEW 73
            :|:|      ..|:.:|::|:..|.||...|::|:.:.:.|:::::::|...:::.:  |.:|..
 Frog    10 LGLF------SCAHADFFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWAD--KLDHLT 66

  Fly    74 ATSQLKLDDYLGHPLHAFRLIKRLVRDW---DSLIFEPILANNAREEFRAFVEVLSRDLGY-PDQ 134
            .|:....:.|||||::||:|:|||..:|   ::||.:.|        ...|:..|:....| |:.
 Frog    67 DTATKDPEGYLGHPVNAFKLMKRLNTEWVKLENLILKDI--------SDGFISNLTIQRQYFPND 123

  Fly   135 SELQGAIKGLARLQKVYNLATSDLADGIIGGLNYGSDLRWRECYEIGVQLFDLGEYQRSLEWLQV 199
            .:..||.|.|.|||..|||.|..::.|.:.|:.:.:.|...:|:::|...:...:|..:..|::.
 Frog   124 EDQTGAAKALLRLQDTYNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQ 188

  Fly   200 AFILLRNSPREEKDADHYLSDIREYASMANFELGNPKKAARLLSQILESQPTHS----------A 254
            |  |.:....||...|..:  :.:|.|.|.::.|:..||..|..:.||..|.|.          :
 Frog   189 A--LSQLDAGEESSLDKVM--VLDYLSYAVYQQGDLDKALTLTKRSLELDPEHQRGNGNLRHIMS 249

  Fly   255 QQTQKYLESRVPGKNVQETK--PSWF---SNYTRLCQGRRLP-EERSGDPLRC-YLDGKRHAYFT 312
            :::.|...|...|..::..|  |...   ..|.:||:|..:. ..|....|.| |.|||:.....
 Frog   250 KESNKSSSSPSEGAELRTRKGRPKDHLEKEKYEKLCRGEGVKMTSRRQKRLFCRYFDGKKDPLLI 314

  Fly   313 LAPLQVEPVHLDPDINVYHGMLSSKQILSIFEEADKEEMVRSAVAGS-GGEGTVRDLRVSQQTWL 376
            |:|.:.|.....|.|..||.::|.::|..: :|..|..:.|:.::.. .|.......|:::..||
 Frog   315 LSPTKQEDEWDKPRIVRYHDIISDEEISKV-KELAKPRLRRATISNPITGVLETAQYRITKSAWL 378

  Fly   377 D-YKSPVMNSVGRIIQFVSGFDMAGAEHMQVANYGVGGQYEPHPDYFEVNLPKNFE----GDRIS 436
            . |:.||:..:.|.|:.|:|.||:.||.:||||||:|||||||.|:.....|..|:    |:|::
 Frog   379 SGYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDFLRKYEPDAFKKLGTGNRVA 443

  Fly   437 TSMFYLSDVEQGGYTVFTKLNVFLPPVKGALVMWHNLHRSLHVDARTLHAGCPVIVGSKRIGNIW 501
            |.:||:||||.||.|||.::...:.|.||..|.|:||..|...|..|.||.|||:||:|.:.|.|
 Frog   444 TWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLVGNKWVSNKW 508

  Fly   502 MHSGYQEFRRPCNLT 516
            :|...|||||||||:
 Frog   509 IHERGQEFRRPCNLS 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaSG2NP_651801.1 P4Ha_N 28..163 CDD:285528 42/138 (30%)
P4Hc 335..503 CDD:214780 70/173 (40%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 26/96 (27%)
P4Hc 337..510 CDD:214780 70/173 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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