DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Fi and Ctrc

DIOPT Version :9

Sequence 1:NP_651800.2 Gene:Jon99Fi / 43622 FlyBaseID:FBgn0039778 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001029047.1 Gene:Ctrc / 76701 MGIID:1923951 Length:268 Species:Mus musculus


Alignment Length:280 Identity:84/280 - (30%)
Similarity:123/280 - (43%) Gaps:53/280 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LAVAAATAIPTPEQKLVPTPVKDVKIQGRITNGYPAYEGKVPYIVGLLFSGNGNW--WCGGSIIG 71
            ||.|::...||....|          ..|:..|..|.....|:.|.|.:..:..|  .||||:|.
Mouse    11 LACASSCGDPTFPPNL----------SARVVGGEDAVPNSWPWQVSLQYLRDDTWRHTCGGSLIT 65

  Fly    72 NTWVLTAAHCTNGASGVTINYGASLRN----QPQYTHWVGSGNFVQHHHYNSGNLHNDISLIRTP 132
            .:.|||||||.|  :.:|...|....|    ..:.:.:........|..:|...|.|||::|:  
Mouse    66 TSHVLTAAHCIN--TNLTYRVGLGKYNLTVEDEEGSVYAEVDTIYVHEKWNRLLLWNDIAIIK-- 126

  Fly   133 HVDFWHLVNKVELPSYNDRYQ-------------DYAGWWAVASGWGGTYDGSPLPDWLQAVDVQ 184
                  |...|||   :|..|             ||.   ...:|||..:...|:.:.||.....
Mouse   127 ------LAEPVEL---SDTIQVACIPEQDSLLPGDYP---CYVTGWGRLWTNGPIAEVLQQGLQP 179

  Fly   185 IMSQSDCSRT--W--SLHDNMICINTNGGKSTCGGDSGGPL--VTHEGN-RLVGVTSFVSSAGCQ 242
            |::.:.|||.  |  .:.:.|:|...:|..|.|.|||||||  ...:|. ::.|:.||.||.||.
Mouse   180 IVNHTTCSRLDWWFIKVRETMVCAGGDGVISACNGDSGGPLNCPVEDGLWQVHGIVSFGSSRGCN 244

  Fly   243 S-GAPAVFSRVTGYLDWIRD 261
            : ..|.||:||:.|:|||::
Mouse   245 TYKKPVVFTRVSAYIDWIKE 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99FiNP_651800.2 Tryp_SPc 37..259 CDD:214473 76/248 (31%)
Tryp_SPc 38..262 CDD:238113 77/251 (31%)
CtrcNP_001029047.1 Tryp_SPc 29..262 CDD:214473 76/248 (31%)
Tryp_SPc 30..265 CDD:238113 77/251 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 147 1.000 Inparanoid score I4390
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

Return to query results.
Submit another query.