DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon99Fi and CG11843

DIOPT Version :10

Sequence 1:NP_651800.2 Gene:Jon99Fi / 43622 FlyBaseID:FBgn0039778 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_651663.1 Gene:CG11843 / 43432 FlyBaseID:FBgn0039630 Length:316 Species:Drosophila melanogaster


Alignment Length:250 Identity:71/250 - (28%)
Similarity:111/250 - (44%) Gaps:36/250 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ITNGYPAYEGKVPYIVGLLF----SGNGNWWCGGSIIGNTWVLTAAHCTNGASGV--TINYGA-- 94
            |..|:||...:.|::..|..    |...:|:|||.:|...:|||||||.....|.  .:..|.  
  Fly    68 IVGGHPAQPREFPHMARLGRRPDPSSRADWFCGGVLISERFVLTAAHCLESERGEVNVVRLGELD 132

  Fly    95 --SLRNQPQYTHWVGSGNFVQHHHYNSGNLHNDISLIR-TPHVDFWHLVNKVELPSYNDRYQDYA 156
              ||........::.:| ::.|..|.....::||.|:: |..|.|....:...||..::|..|. 
  Fly   133 FDSLDEDAAPRDYMVAG-YIAHPGYEDPQFYHDIGLVKLTEAVVFDLYKHPACLPFQDERSSDS- 195

  Fly   157 GWWAVASGWGGTYDGSPLPDWLQAVDVQIMSQSD--CSRTWSLH----------DNMICINTNGG 209
               .:|.|||.|  |..|....|.:.|::....:  |.:..:..          :|.:|:.:...
  Fly   196 ---FIAVGWGST--GLALKPSAQLLKVKLQRYGNWVCKKLLTRQVEEFPRGFDGNNQLCVGSEMA 255

  Fly   210 KSTCGGDSGGPLVTHEGNR-----LVGVTSFVSSAGCQSGAPAVFSRVTGYLDWI 259
            :.||.|||||||:.:....     :||:||...|.| ..|.|.:::||..||.||
  Fly   256 QDTCNGDSGGPLLMYHREYPCMYVVVGITSAGLSCG-SPGIPGIYTRVYPYLGWI 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99FiNP_651800.2 Tryp_SPc 38..262 CDD:238113 70/249 (28%)
CG11843NP_651663.1 Tryp_SPc 68..312 CDD:238113 70/249 (28%)

Return to query results.
Submit another query.