DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon99Fii and svh-1

DIOPT Version :9

Sequence 1:NP_651799.1 Gene:Jon99Fii / 43621 FlyBaseID:FBgn0039777 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:244 Identity:69/244 - (28%)
Similarity:102/244 - (41%) Gaps:34/244 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RITNGYPAYEGKVPYIVGLLFSGNGNWWCGGSIIGNTWVLTAAHC---TNGASGVTINYGASLRN 98
            |:..|:....|..|:...|.........||.||:..|.::|||||   ....|...:..|....|
 Worm   712 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNN 776

  Fly    99 QPQYTHWVGSGN----FVQHHHY---NSGNLHNDISLIRTPH--VDFWHLVNKVELPSYNDRYQD 154
            |.       .||    ::|..|:   ......:||:::..|:  ::|......:.|||.:..|. 
 Worm   777 QT-------DGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYT- 833

  Fly   155 YAGWWAVASGWGGTYDGSPLPDWLQAVDVQIMSQSDCSRSWSLHDNM----ICIN-TNGGKSTCG 214
             .|...|.||||..  |....:.|||..:.|:::.||..|..::.:|    .|.. ..||..:|.
 Worm   834 -PGRQCVVSGWGSM--GLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQ 895

  Fly   215 GDSGGPLVTHEGNR---LVGVTSFVSSAGC-QSGAPAVFSRVTGYLDWI 259
            ||||||......:.   |.||.|:  ..|| |...|.:::.|..||.||
 Worm   896 GDSGGPFACRREDGAFVLAGVISW--GDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon99FiiNP_651799.1 Tryp_SPc 37..259 CDD:214473 67/242 (28%)
Tryp_SPc 38..262 CDD:238113 68/243 (28%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 68/243 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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