DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment PH4alphaEFB and AT4G35810

DIOPT Version :9

Sequence 1:	NP_733371.1	Gene:	PH4alphaEFB / 43620	FlyBaseID:	FBgn0039776	Length:	550	Species:	Drosophila melanogaster
Sequence 2:	NP_001320148.1	Gene:	AT4G35810 / 829735	AraportID:	AT4G35810	Length:	290	Species:	Arabidopsis thaliana

Alignment Length:	213	Identity:	65/213 - (30%)
Similarity:	104/213 - (48%)	Gaps:	29/213 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   339 LEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANYRISKSAWLKTQEDR 403
            ||.:..:|...:||:.:.:.|.:.:..:|:|...::.|.:..||....:..|.|...:|....|.
plant    80 LEVISWEPRAFVYHNFLTNEECEHLISLAKPSMMKSKVVDVKTGKSIDSRVRTSSGTFLNRGHDE 144

  Fly   404 VIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEGLNL---GNRIATVL 465
            ::|.:..|.:|.|.:..::.|.|||::|.:|..||||.|:       .|:..|:   |.||||||
plant   145 IVEEIENRISDFTFIPPENGEGLQVLHYEVGQRYEPHHDY-------FFDEFNVRKGGQRIATVL 202

  Fly   466 FYMSDVEQGGATVFTSLH-------------------TALFPKKGTAAFWMNLHRDGQGDVRTRH 511
            .|:|||::||.|||.:..                   .::.|||..|..:.::..|...|..:.|
plant   203 MYLSDVDEGGETVFPAAKGNVSDVPWWDELSQCGKEGLSVLPKKRDALLFWSMKPDASLDPSSLH 267

  Fly   512 AACPVLTGTKWVSNKWIH 529
            ..|||:.|.||.|.||.|
plant   268 GGCPVIKGNKWSSTKWFH 285

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
PH4alphaEFB	NP_733371.1	P4Ha_N	28..159	CDD:285528
PH4alphaEFB	NP_733371.1	P4Hc	356..529	CDD:214780	59/194 (30%)
AT4G35810	NP_001320148.1	PLN00052	75..289	CDD:177683	65/213 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	91	0.514	Domainoid score	I2609
eggNOG	1	0.900	-	-		E1_KOG1591
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	79	1.000	Inparanoid score	I2378
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm1209
orthoMCL	1	0.900	-	-		OOG6_100878
Panther	1	1.100	-	-	O	PTHR10869
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X129
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	7.860