DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and p4htmb

DIOPT Version :10

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:XP_001340234.2 Gene:p4htmb / 799930 ZFINID:ZDB-GENE-110131-7 Length:510 Species:Danio rerio


Alignment Length:341 Identity:86/341 - (25%)
Similarity:132/341 - (38%) Gaps:103/341 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 EKEIAQQLQLRKMKG--------DDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGELKPSP 314
            |:|.|..::|.::||        .:|.:|:   |..:..|...||:..:...     .|:|:|. 
Zfish   166 EEECAVVVRLAQLKGLMESQVMVPEGQEEL---DQQLNLSPEEIFNFLDLNQ-----DGQLQPH- 221

  Fly   315 SDLRSLRCR---YVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDS-----------EIDLIKR 365
            ..|...|.|   ::|:.         .|:|:             ||.           .::...|
Zfish   222 EILTHSRVRDGIWLTSE---------NLKEI-------------YDGLKADLDGNGLLSLEEFGR 264

  Fly   366 MARPRFRRATVQNSVTGALETANYRISKSAWLKTQE--DRVIETVVQRTADMTGLD---MDSAEE 425
            :....|:|..:|..|..:....|   |:..||...:  .:|::.:.:|...:|.|.   ::.:|.
Zfish   265 LRSDAFQRFLLQRGVERSQLVRN---SRHTWLYQGQGAHQVLQDLRKRVTLLTRLPSSLVELSEP 326

  Fly   426 LQVVNYGIGGHYEPHFDFARKEEQRAFEGLNLGN----------RIATVLFYMSDVEQGGATVF- 479
            ||||.|..||||..|.|......:.|.....|..          |..|||||:::|::||.|.| 
Zfish   327 LQVVRYEQGGHYHAHHDSGPVYPETACTHTRLAANTTSPFQTSCRYITVLFYLNNVQEGGETTFP 391

  Fly   480 ---------------------TSLH-----TALFPKKGTAAFWMNLHRDGQG-----DVRTRHAA 513
                                 |..|     ..:.|.||||.||.|...||:|     |..:.|..
Zfish   392 VADNRTYEEASLIQNDVDLLDTRKHCDKGNLRVKPVKGTAVFWYNYLSDGRGWVGEQDEYSLHGG 456

  Fly   514 CPVLTGTKWVSNKWIH 529
            |.|..|||||:|.||:
Zfish   457 CVVTQGTKWVANNWIN 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..161 CDD:462433
P4Hc 356..529 CDD:214780 64/230 (28%)
p4htmbXP_001340234.2 FRQ1 <204..271 CDD:444056 14/94 (15%)
P4Hc 285..471 CDD:214780 56/188 (30%)
Blue background indicates that the domain is not in the aligned region.

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