DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and p4htma

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_001074160.1 Gene:p4htma / 791209 ZFINID:ZDB-GENE-070112-2222 Length:478 Species:Danio rerio


Alignment Length:343 Identity:68/343 - (19%)
Similarity:115/343 - (33%) Gaps:85/343 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 LQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGELKP----------SPSDLRS 319
            :||.::||...:..:...|.....:...:|.:.:.....:|.|.|:..          |..:||.
Zfish   158 MQLAQLKGLTHSSLLTNPDQEEQLTQDELFSLLDLNQDGLLQREEILSLSHSTDGSWLSSYNLRK 222

  Fly   320 LRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGAL 384
            :.....||     ..|.|.|:|                     .||::....|.:.....:.|..
Zfish   223 IHTGLETN-----PSGVLSLQE---------------------FKRVSGGVLRYSGAAQGLDGHT 261

  Fly   385 ETANYRISKSAWLKTQEDRVIETVVQRTADMTGLD---MDSAEELQVVNYGIGGHYEPHFDFARK 446
            :..........:|......::::|..|...:|.|.   :|.:|.::||.|..|.....|.|.:..
Zfish   262 KVRQRSTHTRLYLGEGTHHLLKSVRNRVTRLTRLPSSLVDLSEAMEVVRYEQGVFSHAHHDSSPT 326

  Fly   447 EEQRAFE----GLNLGNRIA----TVLFYMSDVEQGGATVFTSLHTALF---------------- 487
            ....:..    ..|..|::|    |||.|::..:.||.|.|.......:                
Zfish   327 HPDNSCTHTHLAANTSNQVACRYLTVLLYLNSADSGGETSFPVADNRTYEEEVLGDLSQQYCDKG 391

  Fly   488 -----PKKGTAAFWMNLHRDGQG-----DVRTRHAACPVLTGTKWVSNKWIH-----ERGQEFRR 537
                 |..|||..|.|...||.|     |..:.|..|.|..|.||..:.|::     :|.:.::|
Zfish   392 NLKVKPVAGTALLWYNHLSDGNGWVGELDEFSLHGDCLVTRGFKWTGSVWVNIDPDQQRQERYQR 456

  Fly   538 PCDLE-------EDHGEF 548
            .....       .:||:|
Zfish   457 LVSWHPEGHSKTPEHGDF 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528
P4Hc 356..529 CDD:214780 45/209 (22%)
p4htmaNP_001074160.1 2OG-FeII_Oxy <272..442 CDD:304390 40/169 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583476
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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