DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaEFB and CG31371

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_733375.2 Gene:CG31371 / 43626 FlyBaseID:FBgn0051371 Length:507 Species:Drosophila melanogaster


Alignment Length:529 Identity:134/529 - (25%)
Similarity:229/529 - (43%) Gaps:60/529 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAADWRLMLLLGILLLVGGPANGEVYTALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMD 65
            |...:.::.||.:.|||...|.........:::.||:||:.||..|..||...|.:|..::.:..
  Fly     1 MPVVFSVLWLLQLFLLVESVAGANFARGEEQLQALLDTETQLIDGLRDYIERLERQLEEIRRETS 65

  Fly    66 EYQREHSDASHDITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSD 130
            ..:..||... .:..|:.||:|.:.:.||..:.|..:|......:...|.:.::..:  |..||:
  Fly    66 AIEEIHSQVD-SVEEYMGNPLNVFGILKRFESVWPGLEQKANATLEMVFGERLSDRQ--LTLPSE 127

  Fly   131 EDLNGAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNE 195
            ||...:...||.||..|:||::|::.|.:||.:..:.||..||.|:.|:|    |:.....|:..
  Fly   128 EDYEESLNHLLHLQSVYELDSNSLSLGVVNGFKLGSSMSWGDCLEVARKS----DFPVARFWLES 188

  Fly   196 AMARMLEEPTNHTQSFTKAD-----ILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKR 255
            |:.::.....|.|:|..:.:     |||......|:.|.:..||....|||.|||.::.....||
  Fly   189 ALEKLPSASENSTESQRERESGRVHILEATLNIEYRAGELSRALATAEELLLLLPMNQGIQKAKR 253

  Fly   256 FYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGELKPSPSDLRSL 320
            ..||.:|::             |:||.....:|:...|...||:...|.:|||..:...:..|..
  Fly   254 KIEKAMAKK-------------ELPKGRGQKSKAKKQISKSTEQLLIEEICRGAKQQVTTGSRFN 305

  Fly   321 RCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALE 385
            .|: :....|:|.|.|.:||.|.:|||||::||.:...|.:.:.::..        :...|..:.
  Fly   306 HCQ-LDGSSPWLLLQPSRLEPVSSDPYIVLHHDVLTPKESNELLQLID--------EEEDTKGVS 361

  Fly   386 TANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQR 450
            ..:.::||.|..|          :.|.:.:.||::...:...       |....|....:.|...
  Fly   362 YQSLKLSKLAQKK----------LGRISRLLGLEILELDPWT-------GRRHGHEHITKLEHSS 409

  Fly   451 AFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDG---QGDVRTRHA 512
            ..:      .:|.::..:.....|||.||..|..|:...:|:...|......|   :.|.|:..|
  Fly   410 ELK------HVARLMLNLQAPGMGGAVVFPQLELAVNVPRGSLLHWRTRFAGGSSSEWDYRSGQA 468

  Fly   513 ACPVLTGTK 521
            .||||.|.:
  Fly   469 ICPVLLGVQ 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 36/130 (28%)
P4Hc 356..529 CDD:214780 31/169 (18%)
CG31371NP_733375.2 P4Ha_N 30..156 CDD:285528 36/128 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461749
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391515at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
76.850

Return to query results.
Submit another query.