DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and CG11828

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster


Alignment Length:530 Identity:154/530 - (29%)
Similarity:232/530 - (43%) Gaps:96/530 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 MEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQREHSDASHDITAYVSNPINAYLLTKRLT 96
            |..||:.|..||..:..|....:.|:|.::...:|:....:....|.|:||:||:.::.|.:|..
  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65

  Fly    97 TDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDEDLNGAAVALLRLQDTYQLDTSSVARGKLNG 161
            ||..::..|...:......|....|.  |...||.:|..|...:||.|..|.:|.|.:|.|||:|
  Fly    66 TDVPKLLELAREEFKPGPFQKFIDYD--LSSISDVELETAVTGMLRFQGVYGMDESEMANGKLHG 128

  Fly   162 IQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAMARMLEEPTNHTQSFTKADILEYLAFSTYK 226
            .||::.||:.||..:                            ..|.::..|..    ||...:|
  Fly   129 KQYNSRMSAADCLAV----------------------------ATHLENVDKGK----LACKWFK 161

  Fly   227 EG--NIESALTMTNELLQLLPHHERANGNKRFYEK---------EI-AQQLQLRKMKG----DDG 275
            ..  ..|..|...|.|||        .|..:.|||         :: |.|...|...|    :|.
  Fly   162 VAIDQYEEKLDPVNRLLQ--------TGRSQIYEKLGLTLLAMHDLPASQAAFRDSIGWASKEDN 218

  Fly   276 TDEMPKSDLPVAKSDPAIFDMTERRAYEML----CRGE-LKPSPSDLRSLRCRYVTNRVPFLRLG 335
            ||        :||      .:.::.|:..:    |||: |.||.|   .|||||:.:..||||:.
  Fly   219 TD--------LAK------HLKDKLAHMFVHVDNCRGKNLLPSKS---YLRCRYLRDGSPFLRMA 266

  Fly   336 PLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANYRISKSAWLKTQ 400
            |:|||:::.:|::.::|||:..:|...:..:...|.......:|            |..|.:.|.
  Fly   267 PVKLEQLNIEPFVGLFHDAISPAEQKDLLHLTDSRLEHRKKDSS------------SVEAKVDTN 319

  Fly   401 EDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEGLNLGN-RIATV 464
            ....:..:.||..|:||.|::.:|.|.|.||||||....|.|.   |:.:.|.|..... |.|:.
  Fly   320 ASDHVRRIHQRIEDITGFDLEESEPLTVSNYGIGGQDFIHLDC---EQPKEFIGYYPKEYRSASA 381

  Fly   465 LFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAACPVLTGTKWVSNKWIH 529
            :||:|||:.||...|..|.....|::|:|..|.|....|..|.|:..|.||||.|.:||:.|||.
  Fly   382 MFYLSDVQMGGYASFPDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWIS 446

  Fly   530 ERGQEFRRPC 539
            ..||..|:.|
  Fly   447 GSGQWRRKSC 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 36/126 (29%)
P4Hc 356..529 CDD:214780 55/173 (32%)
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 36/126 (29%)
P4Hc 287..445 CDD:214780 54/172 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461848
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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