DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and CG32199

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_730347.1 Gene:CG32199 / 40028 FlyBaseID:FBgn0052199 Length:509 Species:Drosophila melanogaster


Alignment Length:571 Identity:160/571 - (28%)
Similarity:257/571 - (45%) Gaps:126/571 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQREHSDASHDITAYVSNPINAYLL 91
            |::..|.:|||.|..|.|||:.|::..:.||:.:|...|..:|.......:...|||||:||:.:
  Fly     5 TSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTLTTLEEKEEYVSNPLNAFPM 69

  Fly    92 TKRLTTDWRQVENLMEHDVGTDFLQNI-TQYRSLLKFPSDEDLNGAAVALLRLQDTYQLDTSSVA 155
            .:||..||.:....::..:.:..::.: .|.:|.   |.|:||..|...:.|::..:.|....:.
  Fly    70 LRRLNQDWPKWLRYIKLAIASKKIKEMEVQLKSA---PIDDDLKVALKGMTRIEKFHNLHAEDLT 131

  Fly   156 RGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAM----------------------- 197
            :|.|.|.:.::.:::.||..||...|....:..:..|...|:                       
  Fly   132 KGVLMGKKLNSHLTAPDCVALGDYYYNQTQFSGSTHWYRMALRVHTHPRGMIYAKVLGLKRKRIY 196

  Fly   198 ----ARMLEEPTNHTQSF-TKADILEY--LAFSTYKEGNIESALTMTNELLQLLPHHERANGNKR 255
                ..:|:|..|..:|. |..:..|:  ||....:|.|.::...:.:|.|         :|:::
  Fly   197 KKYAKALLKESLNSDKSKPTPTEKSEWNRLAKEVTREDNYDNVKKLIDEYL---------SGDEK 252

  Fly   256 FYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGE--LKPSPSDLR 318
            .:: |:|.:|:.:..|.:.|                              ||||  .|.||    
  Fly   253 IFQ-EVAARLKRKPTKLERG------------------------------CRGEWPKKSSP---- 282

  Fly   319 SLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGA 383
            .|.|||..:...||:|.|||||.:...|.|::|||.:|::|...::                   
  Fly   283 ELICRYNRDTSAFLKLAPLKLEFLSVQPMILLYHDVLYENEFKSMR------------------- 328

  Fly   384 LETANYRISK-SAWL---------KTQEDRVIETVV-------------QRTADMTGLDMDSAEE 425
             :.|.|..|. ..|.         ..|:|||::.:.             :|.|||:||:|.....
  Fly   329 -DIAMYNGSMIDGWTYVDFDKKGNPKQQDRVVKMIAFQGTTAPFTLSINRRMADMSGLEMRDNMV 392

  Fly   426 LQVVNYGIGGHYEPHFDFAR--KEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFP 488
            |.:.|||:|||:..|.|:..  |.....|.... |:||||.|.|.||:..||.||||.|..|:.|
  Fly   393 LYLTNYGLGGHFGKHVDYVELAKRPPDFFADFG-GDRIATALIYASDIPLGGTTVFTKLKIAVQP 456

  Fly   489 KKGTAAFWMNLHRDGQGDVRTRHAACPVLTGTKWVSNKWIHERGQEFRRPC 539
            |||:|..|.||:..|:.|..|.|:.|||:.|::|:.:||||||.|.|::||
  Fly   457 KKGSALIWFNLNHAGEPDPLTEHSVCPVVLGSRWIISKWIHERQQVFKKPC 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 36/131 (27%)
P4Hc 356..529 CDD:214780 64/197 (32%)
CG32199NP_730347.1 P4Ha_N 6..135 CDD:285528 36/131 (27%)
P4Hc <369..497 CDD:214780 54/128 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462004
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.850

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