DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PH4alphaEFB and CG18231

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_649045.2 Gene:CG18231 / 40026 FlyBaseID:FBgn0036796 Length:470 Species:Drosophila melanogaster


Alignment Length:547 Identity:141/547 - (25%)
Similarity:223/547 - (40%) Gaps:131/547 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NGEVYTALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQREHSDASHDITAYVSNPI 86
            |..||:::..:.:|||.|.:.|||::.|.....:|:..|:..:|....|...:..|...||.|||
  Fly    13 NNSVYSSITRLLKLLEMEEIFITNIKAYTNKLAEKVKNLQAYIDSVDYEFQQSFEDREKYVGNPI 77

  Fly    87 NAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDEDLNGAAVALLRLQDTYQLDT 151
            ||:.|.:|...|..:..|..:..||.:.|..:.:.  :.|.|..:|:..:...:.|::..|.|:.
  Fly    78 NAFSLVRRTHQDLPKWHNYSQQIVGMEELFALEEI--IAKVPDKKDMAYSLGEMHRIEQIYDLEA 140

  Fly   152 SSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMN-----------EAMARMLEEP- 204
            ..:|||::.|.||....|..||..||...:...||....:|..           |.:..:|.:| 
  Fly   141 IELARGRIQGKQYDFRPSIRDCVALGEHKFKREDYQRASMWFRVAIKHEPEGNAEIINSILGDPK 205

  Fly   205 ------------------TNHTQSFTKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERAN 251
                              :|.:.:..:|..:.|.|.:.....:|:|.|   ||||...       
  Fly   206 VNLYTLYAKSMLIFGMIKSNPSMTIAEAKKISYEALNKASLADIKSLL---NELLSQT------- 260

  Fly   252 GNKRFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGELKPSPSD 316
                  :.||..::.:.|.|..|                           ||:.|||:....   
  Fly   261 ------DDEIVYEMNVNKTKPSD---------------------------YEIGCRGQFLRR--- 289

  Fly   317 LRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVT 381
             |:..|.|......||:|.|||.|.::.|||||||||.:.|.|||.:|.....           |
  Fly   290 -RNHVCTYNFTITEFLKLAPLKQEVLNWDPYIVIYHDVLNDDEIDKLKNHLND-----------T 342

  Fly   382 GALETANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARK 446
            .|:|.               :.:.:.:.||..::|.|..:.:::..|...|...|         |
  Fly   343 DAVEV---------------NPIEKRIFQRINELTRLSFEHSDQQIVSKNGPRTH---------K 383

  Fly   447 EEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRH 511
            .::...:|        |:||::::||.|||.||..|..::||:||:..||.|..     |.|:..
  Fly   384 HKKEYLKG--------TLLFFLNNVELGGAMVFPKLKISVFPQKGSCLFWHNTL-----DPRSEP 435

  Fly   512 AACPVLTGTKWVSNKWIHERGQEFRRP 538
            ..||||.|.|.|    |.::|....||
  Fly   436 LECPVLQGNKRV----ITQKGAYNGRP 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 36/130 (28%)
P4Hc 356..529 CDD:214780 44/172 (26%)
CG18231NP_649045.2 P4Ha_N 19..148 CDD:285528 36/130 (28%)
2OG-FeII_Oxy 322..449 CDD:304390 48/178 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461902
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

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