DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and CG18234

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_649043.3 Gene:CG18234 / 40024 FlyBaseID:FBgn0265268 Length:515 Species:Drosophila melanogaster


Alignment Length:550 Identity:164/550 - (29%)
Similarity:266/550 - (48%) Gaps:72/550 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LMLLLGILLLVGGPANG--EVYT---ALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDE 66
            :.::|.|.|:..||..|  |:..   ::|.|:||::.|...|:.:|.|....::|::.:::.:.|
  Fly     1 MFIILSICLISLGPPIGLCEITNSAMSIAGMKELVDLEGFFISEMESYTAALKNKIDLMESLLQE 65

  Fly    67 YQREHSDASHDITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDE 131
            .|.:...:..:...:|::|:||:.|.:||..||.|.|.||.:.||.:.||.|.......: |||.
  Fly    66 VQSKREISRRNPEEFVAHPLNAFSLIRRLHEDWTQAELLMLNQVGLEHLQAIETGLEEAQ-PSDN 129

  Fly   132 DLNGAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSY-VNHDYYHTVLWMNE 195
            |||.|...::.||..|.|..|.:|.|.|.|.||:..:::.:|..|..... .|:|.| .:.|...
  Fly   130 DLNDAIGGIISLQQFYNLQPSDIANGLLMGQQYNASLTTLNCQALANACMNFNYDKY-ALNWFKA 193

  Fly   196 AMARMLEEPTNHTQ----SFTKADILEYLAFST--YKEGNIESALTMTNELLQLLPHHERANGNK 254
            |:....::......    .|...|:  |:.:::  ..:|..::|..:..::..|       :...
  Fly   194 AVDHYNDDRDGQVYREVFDFRLPDL--YINYTSVLVTKGFRKAAWKVLQDVADL-------DATL 249

  Fly   255 RFYEKEIAQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAI-----FDMTERRAYEMLCRGELKPSP 314
            ....|:|.               |:.|.|:|    ||..     ||:|          |.|:...
  Fly   250 WLLRKDIY---------------EVGKIDVP----DPTFIITPWFDVT----------GCLRVGQ 285

  Fly   315 SDLRSLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNS 379
            :. :.|.|.|..|...|||:.|||:|.:...|:||:|||.:|||||..:|.::.|..:      |
  Fly   286 TS-QHLSCHYEKNTSEFLRIAPLKVETLSLKPHIVLYHDVIYDSEISKVKNISLPSLK------S 343

  Fly   380 VTGALETANYRISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFA 444
            ....|...:|.:.   :.|.:||.. ..:..|..||||.|:....:.|:.||||.|....|.|..
  Fly   344 PLRILYAIDYNLK---FAKIREDHQ-SPLSLRIKDMTGEDVQEDTDFQIDNYGICGFRNFHTDNI 404

  Fly   445 RKEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRT 509
            ..::|.|    .||:|:.:::|:|:||.||||..|.:|:..::|:||:|..|.||....|.:...
  Fly   405 ELQDQTA----ELGDRLTSIMFFMNDVAQGGALAFPNLNLTIWPQKGSALVWRNLDHRMQPNQDL 465

  Fly   510 RHAACPVLTGTKWVSNKWIHERGQEFRRPC 539
            .|.:|||:.|:||...||:|||.|.|.|||
  Fly   466 LHVSCPVVVGSKWTLVKWLHERPQMFSRPC 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 43/130 (33%)
P4Hc 356..529 CDD:214780 59/172 (34%)
CG18234NP_649043.3 P4Ha_N 27..157 CDD:285528 43/130 (33%)
P4Hc <371..485 CDD:214780 46/117 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461943
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
98.900

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