DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and P4ha1

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_001303300.1 Gene:P4ha1 / 18451 MGIID:97463 Length:534 Species:Mus musculus


Alignment Length:543 Identity:257/543 - (47%)
Similarity:360/543 - (66%) Gaps:17/543 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WRLMLLLGILLLVGGPANGEVYTALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQR 69
            |  ::|:..:||....|:...:|::.:|.:|:..|..|:|:|:.||:.:||||..:|...::..|
Mouse     3 W--VVLMMAILLPQSLAHPGFFTSIGQMTDLIHNEKDLVTSLKDYIKAEEDKLEQIKKWAEKLDR 65

  Fly    70 EHSDASHDITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDEDLN 134
            ..|.|:.|...:|.:|:||:.|.|||.|:|.::|||:..|:...|:.|:|..|..  ||:|||..
Mouse    66 LTSTATKDPEGFVGHPVNAFKLMKRLNTEWSELENLILKDMSDGFISNLTIQRQY--FPNDEDQV 128

  Fly   135 GAAVALLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAMAR 199
            |||.||.||||||.|||:::::|.|.|:|:.:.::::||||||:.:|...|||||.|||.:|:.:
Mouse   129 GAAKALFRLQDTYNLDTNTISKGNLPGVQHKSFLTAEDCFELGKVAYTEADYYHTELWMEQALTQ 193

  Fly   200 MLEEPTNHTQSFTKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKRFYEKEIAQQ 264
             |||  ....:..|..:|:||:::.|::|:::.||.:|.:||:|.|.|:|||||..::|..::::
Mouse   194 -LEE--GELSTVDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLVYFEYIMSKE 255

  Fly   265 LQLRKMKGDDGTDE--MPKSDLPVAKSDPAIFDMTERRAYEMLCRGE-LKPSPSDLRSLRCRYVT 326
            ....|....|.:|:  .||      |...|:..:.||:.|||||||| :|.:|...:.|.|||..
Mouse   256 KDANKSASGDQSDQKTAPK------KKGIAVDYLPERQKYEMLCRGEGIKMTPRRQKRLFCRYHD 314

  Fly   327 -NRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANYR 390
             ||.|...|.|.|.|:....|.|:.:||.:.|:||:::|.:|:||..||||.:..||.|.||.||
Mouse   315 GNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYR 379

  Fly   391 ISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEGL 455
            :||||||...||.|:..:..|..|:||||:.:||||||.|||:||.||||||||||:|..||..|
Mouse   380 VSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFREL 444

  Fly   456 NLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAACPVLTGT 520
            ..||||||.|||||||..||||||..:..:::||||||.||.||...|:||..|||||||||.|.
Mouse   445 GTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGN 509

  Fly   521 KWVSNKWIHERGQEFRRPCDLEE 543
            |||||||:|||||||||||.|.|
Mouse   510 KWVSNKWLHERGQEFRRPCTLSE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 55/130 (42%)
P4Hc 356..529 CDD:214780 107/172 (62%)
P4ha1NP_001303300.1 P4Ha_N 24..153 CDD:285528 55/130 (42%)
TPR 205..238 12/32 (38%)
P4Hc 345..518 CDD:214780 107/172 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 215 1.000 Domainoid score I2702
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H30998
Inparanoid 1 1.050 512 1.000 Inparanoid score I1297
Isobase 1 0.950 - 0 Normalized mean entropy S3137
OMA 1 1.010 - - QHG52324
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - otm42846
orthoMCL 1 0.900 - - OOG6_100878
Panther 1 1.100 - - LDO PTHR10869
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2705
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.820

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