DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and C14E2.4

DIOPT Version :10

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_001359861.1 Gene:C14E2.4 / 182616 WormBaseID:WBGene00015773 Length:311 Species:Caenorhabditis elegans


Alignment Length:243 Identity:60/243 - (24%)
Similarity:103/243 - (42%) Gaps:32/243 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 SLRCRYVTNRVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEI----DLIKRMARPRFRRATVQNS 379
            |:..|||.      :...:::|.:...|.:|||.|.....::    :|:|.:      :...|..
 Worm    69 SICIRYVQ------QFYEVRMEILSWSPPLVIYRDVFSKKQVSDYLELLKNL------KMNEQKV 121

  Fly   380 V--TGALETANYRISKS----AWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYE 438
            |  .|.:..:.||.:..    |....:...:::|..|.   :...|....|::..::|..||||.
 Worm   122 VRDDGEIAYSTYRQANGTITPAHSHAEAQSLMDTATQL---LPVFDFQYTEQISALSYIKGGHYA 183

  Fly   439 PHFD---FARKEEQRAFEGLNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLH 500
            .|.|   ||..|:.....| .:|||:||.:......|:||.|:|..|........|.|..|.|.:
 Worm   184 LHTDFLTFANAEDSNRHFG-EMGNRLATFIMVFKKAEKGGGTLFPQLGNVFRANPGDAFLWFNCN 247

  Fly   501 RDGQGDVRTRHAACPVLTGTKWVSNKWIHERGQEFRRPCDLEEDHGEF 548
            .:.:.:.::.|..||:..|.|.::..||....|..|   :::|..|.|
 Worm   248 GNLEREAKSLHGGCPIRAGEKIIATIWIRIFNQPIR---EMQETGGSF 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..161 CDD:462433
P4Hc 356..529 CDD:214780 44/185 (24%)
C14E2.4NP_001359861.1 P4Hc 100..276 CDD:214780 44/185 (24%)
Blue background indicates that the domain is not in the aligned region.

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