DRSC/TRiP Functional Genomics Resources

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Protein Alignment PH4alphaEFB and p4ha1

DIOPT Version :9

Sequence 1:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:544 Identity:257/544 - (47%)
Similarity:345/544 - (63%) Gaps:38/544 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLGILLLVGGPANGEVYTALAEMEELLETESVLITNLEGYIRVQEDKLNFLKNKMDEYQREHSDA 74
            |||:.    ..|:.:.:|::..|.:||.||..|:|:|:.||:.:|.||..:|...|:.......|
 Frog     9 LLGLF----SCAHADFFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADKLDHLTDTA 69

  Fly    75 SHDITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLLKFPSDEDLNGAAVA 139
            :.|...|:.:|:||:.|.|||.|:|.::|||:..|:...|:.|:|..|..  ||:|||..|||.|
 Frog    70 TKDPEGYLGHPVNAFKLMKRLNTEWVKLENLILKDISDGFISNLTIQRQY--FPNDEDQTGAAKA 132

  Fly   140 LLRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAMARMLEEP 204
            ||||||||.|||.::::|.|.|:::.|.::::|||:||:.:|.:.|||||.|||.:|::::   .
 Frog   133 LLRLQDTYNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYHTELWMEQALSQL---D 194

  Fly   205 TNHTQSFTKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKR-FYEKEI------- 261
            .....|..|..:|:||:::.|::|:::.|||:|...|:|.|.|:|.|||.| ...||.       
 Frog   195 AGEESSLDKVMVLDYLSYAVYQQGDLDKALTLTKRSLELDPEHQRGNGNLRHIMSKESNKSSSSP 259

  Fly   262 AQQLQLRKMKGDDGTDEMPKSDLPVAKSDPAIFDMTERRAYEMLCRGE-LKPSPSDLRSLRCRYV 325
            ::..:||..||      .||             |..|:..||.||||| :|.:....:.|.|||.
 Frog   260 SEGAELRTRKG------RPK-------------DHLEKEKYEKLCRGEGVKMTSRRQKRLFCRYF 305

  Fly   326 TNRV-PFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANY 389
            ..:. |.|.|.|.|.|:....|.||.|||.:.|.||..:|.:|:||.||||:.|.:||.||||.|
 Frog   306 DGKKDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPITGVLETAQY 370

  Fly   390 RISKSAWLKTQEDRVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQRAFEG 454
            ||:|||||...||.|:..:.:|...:|||||.:||||||.||||||.|||||||.||.|..||:.
 Frog   371 RITKSAWLSGYEDPVVARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDFLRKYEPDAFKK 435

  Fly   455 LNLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAACPVLTG 519
            |..|||:||.||||||||.||||||..:..|::||||||.||.||...|:||..|||||||||.|
 Frog   436 LGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDYSTRHAACPVLVG 500

  Fly   520 TKWVSNKWIHERGQEFRRPCDLEE 543
            .|||||||||||||||||||:|.|
 Frog   501 NKWVSNKWIHERGQEFRRPCNLSE 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 56/130 (43%)
P4Hc 356..529 CDD:214780 110/172 (64%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 32/86 (37%)
P4Hc 337..510 CDD:214780 110/172 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 207 1.000 Domainoid score I2817
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H30998
Inparanoid 1 1.050 505 1.000 Inparanoid score I1308
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - otm47957
Panther 1 1.100 - - LDO PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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