DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2224 and RRI1

DIOPT Version :10

Sequence 1:NP_651796.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_010065.2 Gene:RRI1 / 851310 SGDID:S000002375 Length:440 Species:Saccharomyces cerevisiae


Alignment Length:177 Identity:45/177 - (25%)
Similarity:70/177 - (39%) Gaps:32/177 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SEAAADKTTNSKPSFDRNQKPSYN--RTDSLLAGSLR---LVYVPGDTMEVFLKLA------LAN 267
            :|:.|..:...|||    |:|.::  ...|||...|:   ...:|..|..:..||:      .|.
Yeast    26 TESIALSSMRFKPS----QEPEFHALSQSSLLKTKLKQQSSTDIPSYTHVLISKLSCEKITHYAV 86

  Fly   268 TSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNTMHEEQIFDVQ--DQM----------- 319
            ...|||..|:|.|...::.:.:.........||....|...|...:.||  |:|           
Yeast    87 RGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRD 151

  Fly   320 ----QLITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAP 362
                :|..:||.|:||....:||::|:.|....|......:|||..|
Yeast   152 YKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_651796.1 USP8_dimer 11..120 CDD:462647
MPN_AMSH_like 247..419 CDD:163697 35/142 (25%)
RRI1NP_010065.2 MPN_RPN11_CSN5 62..346 CDD:163700 34/137 (25%)
Blue background indicates that the domain is not in the aligned region.

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