DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2224 and stambpa

DIOPT Version :9

Sequence 1:NP_001263108.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_956792.1 Gene:stambpa / 797422 ZFINID:ZDB-GENE-040426-1551 Length:418 Species:Danio rerio


Alignment Length:428 Identity:186/428 - (43%)
Similarity:271/428 - (63%) Gaps:39/428 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRMANVYLREGNHENAFILYLRYMTLFIEK 77
            |..::|::.|:..|:.::|.:::|..||:|||.|::||||:|..|||.|:|||||.:|:||||||
Zfish     9 VSSEDRVRALTKLGSSVDVSEDVPPRRYFRSGMEIIRMANIYADEGNVEHAFILYNKYITLFIEK 73

  Fly    78 IRQHPDYGSVK-AEVRDINRKIKDEIMPTTEKLRAKLLTHYQREYEQFLASKEAE---RVKELER 138
            :.:|.:|.:.. .|.::..||:|:...|..|:|:..||..|.:|:.::|..|.||   |..|:.:
Zfish    74 LPKHREYKTANIPEKKETMRKLKEIAFPKAEELKKLLLKQYDKEHAEYLVRKRAEDAARAVEMLK 138

  Fly   139 ERERERERQR-----QKEREKAGSSAIPSLI-----PANLHVLIDEGN---QPSAPDLGLLDQVV 190
            ::|:|.:|||     |::||:...||...:|     ......::.|.:   .|:|||:.|.|  |
Zfish   139 QQEQEAQRQRLAELHQRQREQEQFSAFEEMIRRQELEKERRRIVQEFSIPVSPTAPDVLLPD--V 201

  Fly   191 YPNDFPTGANRSLPGSGLLLPAASEAAADKTTNSK--PSFDRNQKPS--YNRTDSLLAGSLRLVY 251
            :.           |....|.|....|.|   ||.:  |:|||:.|||  .:...|.|...||.::
Zfish   202 HG-----------PPQASLSPQTPPAGA---TNHQGLPAFDRSLKPSVPVSAGHSALVNGLRQLF 252

  Fly   252 VPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNTMHEEQIFDVQ 316
            ||.:..:.|||||..||::.:||||:|.|.|.:|...:||:|.|:|.|.||.|:|.:||::|.:|
Zfish   253 VPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTENEEELFLIQ 317

  Fly   317 DQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAPKYNTTGFFILTPHYGLDYI 381
            ||..|||||||||||||||||||||||||||||:|:||::||||:||:|.||:|.|| .||:|.:
Zfish   318 DQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPKFNETGYFRLT-DYGMDDV 381

  Fly   382 AQCRQSGFHPHPNDPPLFMEAQHIRMDNQAKIKVIDLR 419
            ..|:|.||||||.|||||..:.|:.: ....:.::|||
Zfish   382 GTCKQRGFHPHPKDPPLFAASHHVSI-TDGSVTMLDLR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_001263108.1 USP8_dimer 16..119 CDD:286108 44/103 (43%)
MPN_AMSH_like 247..419 CDD:163697 97/171 (57%)
stambpaNP_956792.1 USP8_dimer 13..114 CDD:286108 43/100 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 199..218 6/31 (19%)
MPN_AMSH_like 248..418 CDD:163697 97/171 (57%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 329..342 12/12 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580343
Domainoid 1 1.000 146 1.000 Domainoid score I4486
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4719
Inparanoid 1 1.050 340 1.000 Inparanoid score I2330
OMA 1 1.010 - - QHG49824
OrthoDB 1 1.010 - - D411229at2759
OrthoFinder 1 1.000 - - FOG0002716
OrthoInspector 1 1.000 - - otm24716
orthoMCL 1 0.900 - - OOG6_103166
Panther 1 1.100 - - LDO PTHR12947
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1402
SonicParanoid 1 1.000 - - X1584
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.