DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2224 and stambpb

DIOPT Version :9

Sequence 1:NP_001263108.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001032659.1 Gene:stambpb / 641572 ZFINID:ZDB-GENE-051127-31 Length:418 Species:Danio rerio


Alignment Length:438 Identity:192/438 - (43%)
Similarity:273/438 - (62%) Gaps:59/438 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRMANVYLREGNHENAFILYLRYMTLFIEK 77
            :.|:||::.|:..|..:|:::::|:.||:|||.||:|||:||..|||.|:||:||.:|:||||||
Zfish     9 LSPEERVRALTKKGGAVEMNESVPLRRYFRSGMEMIRMAHVYAEEGNTEHAFVLYNKYITLFIEK 73

  Fly    78 IRQHPDYG-SVKAEVRDINRKIKDEIMPTTEKLRAKLLTHYQREYEQFLASK--EAERV-KELER 138
            :.:||:|. |...|.::|.||:||...|..|:|:..||..|:||:..:::.|  |||.| :||.|
Zfish    74 LPKHPEYKLSNIPEKKEILRKLKDTAFPQAEQLKKLLLRRYEREHADYISKKRVEAEAVERELSR 138

  Fly   139 ERERERERQR-----QKEREKAGSSAIPSLI--------PANLHVLIDEGNQPSAP--DLGLLDQ 188
            :||.:.||:|     ::::|:...|....:|        |...|.       |:||  |..|:..
Zfish   139 QRELDAERRRVAELQRRQQEQEQFSIFEEMIQQRERHRHPHTHHT-------PAAPQTDTPLIPG 196

  Fly   189 VVYP----NDFPT--------GANRSLPGSGLLLPAASEAAADKTTNSKPSFDRNQKPSYNRTDS 241
            :..|    .:.||        .||.|.|.:    ||            .|:|||:.|||:..|  
Zfish   197 IQGPPVPFPESPTPPQSPQQPSANHSTPSA----PA------------PPTFDRSLKPSHLTT-- 243

  Fly   242 LLAGSLRLVYVPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNT 306
             |...||.:.||.:....||:||..||.:.:||||:|.|.|::|...:||::.|:|.|.||.|:|
Zfish   244 -LIDGLRQIAVPAELCGKFLRLANNNTIRAVETCGILCGTLNRNAFTVTHVVVPKQCGGPDYCDT 307

  Fly   307 MHEEQIFDVQDQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAPKYNTTGFFI 371
            .:||::|.||||..|||||||||||||||||||||||||||||:|:||::||||:||:|.||:|.
Zfish   308 ENEEELFLVQDQYNLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSPKFNQTGYFR 372

  Fly   372 LTPHYGLDYIAQCRQSGFHPHPNDPPLFMEAQHIRMDNQAKIKVIDLR 419
            || .||::.|:.|.|.||||||.|||||....|| :..:..:.::|||
Zfish   373 LT-DYGMEEISTCAQKGFHPHPKDPPLFTGGSHI-IITEDTVSMLDLR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_001263108.1 USP8_dimer 16..119 CDD:286108 49/103 (48%)
MPN_AMSH_like 247..419 CDD:163697 97/171 (57%)
stambpbNP_001032659.1 USP8_dimer 13..116 CDD:286108 49/102 (48%)
MPN_AMSH_like 248..418 CDD:163697 97/171 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580344
Domainoid 1 1.000 146 1.000 Domainoid score I4486
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4719
Inparanoid 1 1.050 340 1.000 Inparanoid score I2330
OMA 1 1.010 - - QHG49824
OrthoDB 1 1.010 - - D411229at2759
OrthoFinder 1 1.000 - - FOG0002716
OrthoInspector 1 1.000 - - otm24716
orthoMCL 1 0.900 - - OOG6_103166
Panther 1 1.100 - - O PTHR12947
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1584
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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