DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2224 and psmd7

DIOPT Version :9

Sequence 1:NP_001263108.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001032349.1 Gene:psmd7 / 447971 XenbaseID:XB-GENE-1005422 Length:320 Species:Xenopus tropicalis


Alignment Length:31 Identity:12/31 - (38%)
Similarity:25/31 - (80%) Gaps:1/31 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 LASKEAERVKELERERERERERQRQKEREKA 155
            :|:::||: ||.:.:.|.::||:.:||:||:
 Frog   280 IANRDAEK-KEGQEKEESKKERKDEKEKEKS 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_001263108.1 USP8_dimer 16..119 CDD:286108
MPN_AMSH_like 247..419 CDD:163697
psmd7NP_001032349.1 MPN_RPN7_8 7..285 CDD:163693 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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