DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2224 and cops5

DIOPT Version :9

Sequence 1:NP_001263108.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_957019.1 Gene:cops5 / 393698 ZFINID:ZDB-GENE-040426-1686 Length:334 Species:Danio rerio


Alignment Length:152 Identity:35/152 - (23%)
Similarity:59/152 - (38%) Gaps:29/152 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 LKLAL-ANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNTM---HEEQIFDVQDQMQL 321
            ||:.: |.:..|:|..|::.|.:....:.|........:||....|..   :|.....:::..|:
Zfish    61 LKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV 125

  Fly   322 ----ITLGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEALAIVCAP-------KYNTTGFFILTPH 375
                ..:||.|:||....:||.:|:.|....|......:|:|..|       |.| .|.|...| 
Zfish   126 GRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVN-LGAFRTYP- 188

  Fly   376 YGLDYIAQCRQSGFHPHPNDPP 397
                       .|:.| |::.|
Zfish   189 -----------KGYKP-PDEGP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_001263108.1 USP8_dimer 16..119 CDD:286108
MPN_AMSH_like 247..419 CDD:163697 35/152 (23%)
cops5NP_957019.1 MPN_RPN11_CSN5 42..312 CDD:163700 35/152 (23%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 136..149 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1310
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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