DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2224 and eIF3f2

DIOPT Version :10

Sequence 1:NP_651796.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster


Alignment Length:128 Identity:32/128 - (25%)
Similarity:47/128 - (36%) Gaps:49/128 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PQERM-------KHLSHCGNLIE----------------VD---KNMPV-TRYY-------RSGT 45
            |.||:       |.:|...:||.                ||   ||..: ||.|       ..||
  Fly    87 PNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGT 151

  Fly    46 EMLRMANVYLREGNHENAFILYLRYMTLFIEKIRQH----------PDYGSVKAEVRDINRKI 98
            :.|..:.|.| |.::||:.::.||    .|||..|.          |:...|....||:..::
  Fly   152 KGLMFSLVPL-EISNENSDLVALR----CIEKQSQQQASKQMERFVPELAQVVDATRDMQHRL 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_651796.1 USP8_dimer 11..120 CDD:462647 32/128 (25%)
MPN_AMSH_like 247..419 CDD:163697
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 32/128 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.