DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2224 and Y76B12C.6

DIOPT Version :9

Sequence 1:NP_001263108.1 Gene:CG2224 / 43617 FlyBaseID:FBgn0039773 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001294584.1 Gene:Y76B12C.6 / 177000 WormBaseID:WBGene00022300 Length:554 Species:Caenorhabditis elegans


Alignment Length:442 Identity:94/442 - (21%)
Similarity:162/442 - (36%) Gaps:106/442 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRMANVYLREGNHENAFILYLRYMTLFIEK 77
            :.|:.|::.|.:..| ||..:.:|:.|||....::..|...||:....|.|||::.|.......:
 Worm    18 MNPELRVRQLRYAAN-IEASQMVPLARYYEVLIDLSAMGLEYLKSMKLERAFIIFKRIEYFIYHR 81

  Fly    78 IRQHPDYGSVKAEVR-DINRKIK-----------DEIMPTTEKLRAKLLTHYQREYEQFLASKEA 130
            :..|..|.:.::..: .|.|:|.           |.:||.           |:|:...|...:..
 Worm    82 LLNHTGYKTFESAAKAQIMRRIPMIMYVAQQLIIDFVMPV-----------YERQAAYFRYEELQ 135

  Fly   131 ERVKELERERER-------ERERQRQKEREKAGSS---AIPSLIPANLHVLIDEGNQPSAPDLGL 185
            .|:|.|..:..|       :||.|..:|.|:..:.   .:.|.:|.  .||.||.:..:.|    
 Worm   136 RRLKILNPDAWRMYMTEFAQREAQFYREAERISTRFGVELQSFLPQ--EVLPDEHHPSNFP---- 194

  Fly   186 LDQVVYPNDFPTG------------ANRSLPGSGL-------LLPAASEAAADKTTNSKPSFDRN 231
                  |..||.|            |:|.|..:.|       |.|.|.:...|....:..|...|
 Worm   195 ------PRTFPVGTLNKPKTNEQMSASRILDAAILAMNTNTNLPPIAGDQPVDTLIRNINSMMNN 253

  Fly   232 QKPSYNRTDS----------LLAGSLRLVYVPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQ 286
            ...::.:|.:          .....:|.:.:|.| .::.|:|..:...:|  |.....||:    
 Worm   254 ALTNFFQTKNQEEQERVFREAFPDFMRAMAIPHD-KDLVLELPQSADCRN--TYSPRVGHM---- 311

  Fly   287 LYITHIITPQQQGTPDSCNTMHEE---QIFDVQDQMQLIT-LGWIHTHPTQTAFLSSVDLHTHCS 347
                :.:.|......|:......|   |..:.|.:..|.| :|.:    |:|...:|.|.   ..
 Worm   312 ----YGVPPGGSAAADALRVPQAEEHRQPGEYQPKQSLDTYIGLL----TKTFEHNSADA---TG 365

  Fly   348 YQIMMPEALAIVCAPKYNTTGFFILTPHYGLDYIAQCR-QSGFHPHPNDPPL 398
            |:::..: :....:|  :|.||.:.     ||.|.... |....|.|..|.|
 Worm   366 YKVLQYQ-VDHTTSP--STAGFMLF-----LDPIVPAAVQQASAPPPAPPQL 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2224NP_001263108.1 USP8_dimer 16..119 CDD:286108 26/114 (23%)
MPN_AMSH_like 247..419 CDD:163697 34/157 (22%)
Y76B12C.6NP_001294584.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103166
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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