DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG2224 and mysm1

DIOPT Version :9

Sequence 1:	NP_001263108.1	Gene:	CG2224 / 43617	FlyBaseID:	FBgn0039773	Length:	420	Species:	Drosophila melanogaster
Sequence 2:	XP_012817008.2	Gene:	mysm1 / 100126685	XenbaseID:	XB-GENE-1032957	Length:	860	Species:	Xenopus tropicalis

Alignment Length:	135	Identity:	29/135 - (21%)
Similarity:	48/135 - (35%)	Gaps:	28/135 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   256 TMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGTPDSCNTM------HEEQIFD 314
            |.|..|.|.|.......|..|:|.|..::::..:       :....:.||::      ..:.:..
Frog   588 TCEAMLILDLHAHVSMAEVIGLLGGRYTESESVV-------EICAAEPCNSLSTGLQCEMDPVSQ 645

  Fly   315 VQDQMQLIT-----LGWIHTHPTQTAFLSSVDLHTHCSYQIMMPEA----LAIVCAPKYNTTGFF 370
            .|....|.:     :||.|:||......|..|:.|...||......    |.::.:| ||..
Frog   646 TQASEALASRGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQNYFSRGGAKFLGMIISP-YNQR--- 706

  Fly   371 ILTPH 375
              .||
Frog   707 --NPH 709

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG2224	NP_001263108.1	USP8_dimer	16..119	CDD:286108
CG2224	NP_001263108.1	MPN_AMSH_like	247..419	CDD:163697	29/135 (21%)
mysm1	XP_012817008.2	Myb_DNA-binding	122..166	CDD:395191
		SWIRM	391..470	CDD:398234
		MPN_2A_DUB	579..761	CDD:163698	29/135 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910