DRSC/TRiP Functional Genomics Resources

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Protein Alignment aralar1 and CG18418

DIOPT Version :10

Sequence 1:NP_001247368.1 Gene:aralar1 / 43616 FlyBaseID:FBgn0028646 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_647924.2 Gene:CG18418 / 38572 FlyBaseID:FBgn0035568 Length:311 Species:Drosophila melanogaster


Alignment Length:290 Identity:80/290 - (27%)
Similarity:138/290 - (47%) Gaps:28/290 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 RFTLGSFAGAVGATVVYPIDLVKTRMQNQRAGSYIGEVAYRNSWDCFKKVVRHEGFMGLYRGLLP 421
            :|.:|..:|.:...:|.|:||:|||||   ....:|...|:||::...||:::||.:.||.||..
  Fly    17 KFVMGGTSGMLATCIVQPLDLLKTRMQ---ISGTLGTREYKNSFEVLSKVLKNEGILSLYNGLSA 78

  Fly   422 QLMGVAPEKAIKLTVNDLVRDKLTDKKGNIPTW-AEVLAGGCAGASQVVFTNPLEIVKIRLQVAG 485
            .|:..|...:.|:.|..:..|......||.|:. |.:..|..|||...:..||.|:..||:....
  Fly    79 GLLRQATYTSAKMGVYQMELDWYRKNFGNY
PSMVASMTMGIVAGAFGAMCGNPAEVALIRMMSDN 143

  Fly   486 EIASGSK----------IRAWSVVRELGLFGLYKGARACLLRDVPFSAIYFPTYAHTKAMMADKD 540
            .:....:          :|   :|::.|:..|::|....:.|.:..:.:...:|:..|..:   .
  Fly   144 RLMPEDRRNYKNVGDAFVR---IVKDEGVVALWRGCLPTVGRAMVVNMVQLASYSLMKNQL---H 202

  Fly   541 GY---NHPLTLLAAGAIAGVPAASLVTPADVIKTRL-QVVARSGQTTYTGVWDATKKIMAEEGPR 601
            ||   ..||.|.|| .::|:..:....|.|:.|||: |:....|:..|:|..|..||::..||..
  Fly   203 GYLSEGIPLHLTAA-LVSGLLTSVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKKVLKNEGAF 266

  Fly   602 AFWKGTAARVFRSSPQFGVTLVTYELLQRL 631
            |.|||....:.|..|.   |:.::..|:::
  Fly   267 AVWKGFTPYLMRMGPH---TIFSFVFLEQM 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aralar1NP_001247368.1 FRQ1 32..178 CDD:444056
Mito_carr 350..448 CDD:395101 29/90 (32%)
Mito_carr 449..539 CDD:395101 21/100 (21%)
Mito_carr 544..633 CDD:395101 28/89 (31%)
CG18418NP_647924.2 Mito_carr 10..108 CDD:395101 30/93 (32%)
Mito_carr 109..205 CDD:395101 20/101 (20%)
Mito_carr 208..300 CDD:395101 28/90 (31%)
Blue background indicates that the domain is not in the aligned region.

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