DRSC/TRiP Functional Genomics Resources

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Protein Alignment aralar1 and Shawn

DIOPT Version :10

Sequence 1:NP_001247368.1 Gene:aralar1 / 43616 FlyBaseID:FBgn0028646 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_001027071.1 Gene:Shawn / 3772641 FlyBaseID:FBgn0031039 Length:387 Species:Drosophila melanogaster


Alignment Length:347 Identity:83/347 - (23%)
Similarity:135/347 - (38%) Gaps:110/347 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 VGATVVYPIDLVKTRMQNQR----------------------------------AGSYIGEVAYR 397
            |.|..:.|:|::|||:|.|:                                  |..:.|.:   
  Fly    52 VTACFMTPLDVIKTRLQAQQQALLSNKCFLYCNGLMDHICPCGPDTPNPAAAKPAPRFSGTI--- 113

  Fly   398 NSWDCFKKVVRHEGFMGLYRGLLPQLMGVAPEKAIKLTVNDLVRDKLTD------KKGN------ 450
               |.|.|:.|.||...|:.||.|.|:...|...|.....:..:.:.||      ::.:      
  Fly   114 ---DAFIKISRTEGIGSLWSGLSPTLISALPSTIIYFVAYEQFKARFTDIHYKYTRRPDTIAHDI 175

  Fly   451 ---IPTWAEVLAGGCAGASQVVFTNPLEIVKIRLQ--------VAGEIASGSKIRAWSVVRELGL 504
               ||....:|||.......|...:|:|:::.::|        :.|.|.        .||:..|:
  Fly   176 PHPIPFLVPLLAGVSGRILAVTCVSPVELIRTKMQSQRMTHAEMFGTIR--------QVVQSQGV 232

  Fly   505 FGLYKGARACLLRDVPFSAIYFPTYAHTKAMMADKDGYNHPL--TLLAAGAIAGVPAASLVTPAD 567
            .||::|....:|||||||.||:..|.:.|:..    |...|.  ...|||||:|..||::.||.|
  Fly   233 LGLWRGLPPTILRDVPFSGIYWTCYEYLKSSF----GVVEPTFSFSFAAGAISGSVAATITTPFD 293

  Fly   568 VIKTRLQVVARSGQTTYTGVWDATKKIMAEEGPR---------------------AFWKGTAARV 611
            |:||..|:  ..|:          |.|.::..|:                     |.:.|...|:
  Fly   294 VVKTHEQI--EFGE----------KFIFSDNPPKQVATKSVAMRLASIYRMGGVPAIFSGLGPRL 346

  Fly   612 FRSSPQFGVTLVTYELLQRLFY 633
            |:.:|...:.:.::|..:..||
  Fly   347 FKVAPACAIMISSFEYGKSFFY 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aralar1NP_001247368.1 FRQ1 32..178 CDD:444056
Mito_carr 350..448 CDD:395101 26/120 (22%)
Mito_carr 449..539 CDD:395101 28/106 (26%)
Mito_carr 544..633 CDD:395101 26/111 (23%)
ShawnNP_001027071.1 Mito_carr 39..159 CDD:395101 24/112 (21%)
Mito_carr 178..265 CDD:395101 28/98 (29%)
Mito_carr 268..371 CDD:395101 28/113 (25%)
Blue background indicates that the domain is not in the aligned region.

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