DRSC/TRiP Functional Genomics Resources

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Protein Alignment aralar1 and Rim2

DIOPT Version :9

Sequence 1:NP_001247368.1 Gene:aralar1 / 43616 FlyBaseID:FBgn0028646 Length:707 Species:Drosophila melanogaster
Sequence 2:NP_608615.1 Gene:Rim2 / 33350 FlyBaseID:FBgn0031359 Length:365 Species:Drosophila melanogaster


Alignment Length:371 Identity:90/371 - (24%)
Similarity:139/371 - (37%) Gaps:115/371 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GSFAGAVGATVVYPIDLVKTRMQNQRA---GSYIGEVA-------------------------YR 397
            |..||.|||.|..|:::||||:|:..|   .|.:.|.|                         .|
  Fly    15 GGSAGTVGAVVTCPLEVVKTRLQSSTAFMTPSRLAENAGGGPANGGQSELLRPEQRRKLSTTILR 79

  Fly   398 NS------------------------------WDCFKKVVRHEGFMGLYRGLLPQLMGVAPEKAI 432
            |.                              ..|.:.:|::||...|::||.|.|:||||.:||
  Fly    80 NRSQPQVIGGVRRIMAISHCGISSTTPKSMSIVQCLRHIVQNEGPRALFKGLGPNLVGVAPSRAI 144

  Fly   433 --------KLTVNDL---VRDKLTDKKGNIPTWAEVLAGGCAGASQVVFTNPLEIVKIRLQVAGE 486
                    |.|:|.|   .||.         ....:::...||......|||:..||.|:|    
  Fly   145 YFCTYSQTKNTLNSLGFVERDS---------PLVHIMSAASAGFVSSTATNPIWFVKTRMQ---- 196

  Fly   487 IASGSKIRAWSVVREL--------GLFGLYKGARACLLRDVPFSAIYFPTYAHTKAMMADKDGYN 543
            :...||::  ..||:.        |:...|||..|... .:..:.::|..|...|:.:.::....
  Fly   197 LDYNSKVQ--MTVRQCIERVYAQGGVAAFYKGITASYF-GICETMVHFVIYEFIKSKLLEQRNQR 258

  Fly   544 HP--------LTLLAAGAIAGVPAASLVTPADVIKTRLQVVARSGQTTYTGVWDATKKIMAEEGP 600
            |.        |..:.|||::...|:.:..|.:|.:|||    |.....|...|.....:..|||.
  Fly   259 HTDTKGSRDFLEFMMAGAVSKTIASCIAYPHEVARTRL----REEGNKYNSFWQTLHTVWKEEGR 319

  Fly   601 RAFWKGTAARVFRSSPQFGVTLVTYE----LLQRLF------YVDF 636
            ...::|.|.::.|..|...:.:.|||    :|.|.|      :.||
  Fly   320 AGLYRGLATQLVRQIPNTAIMMATYEAVVYVLTRRFNNKSNEFYDF 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
aralar1NP_001247368.1 EF-hand_7 35..99 CDD:290234
EF-hand_8 51..99 CDD:290545
EF-hand_7 81..134 CDD:290234
EFh 84..135 CDD:298682
EF-hand_7 111..173 CDD:290234
Mito_carr 350..448 CDD:278578 40/155 (26%)
PTZ00169 358..631 CDD:240302 86/358 (24%)
Mito_carr 449..539 CDD:278578 21/97 (22%)
Mito_carr 544..633 CDD:278578 27/106 (25%)
Rim2NP_608615.1 Mito_carr 8..156 CDD:278578 35/140 (25%)
Mito_carr 163..253 CDD:278578 23/105 (22%)
Mito_carr 268..355 CDD:278578 25/90 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442009
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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