DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2218 and ube4a

DIOPT Version :9

Sequence 1:NP_001287613.1 Gene:CG2218 / 43611 FlyBaseID:FBgn0039767 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_009290012.1 Gene:ube4a / 557121 ZFINID:ZDB-GENE-070410-21 Length:1076 Species:Danio rerio


Alignment Length:90 Identity:30/90 - (33%)
Similarity:49/90 - (54%) Gaps:13/90 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 RDQSTLS-IPEEFLDSITWELMIFPTVLPSGKV-VDQSTIDKHAEEEAKWGRQPSDPF--TGLEF 275
            :::.|.| .|:||||.|...||:.|.:|||..| ||:|||.:|...:      .:|||  :.|..
Zfish   987 QEEETFSDAPDEFLDPIMSTLMLDPVLLPSSNVTVDRSTIARHLLSD------QTDPFNRSPLTM 1045

  Fly   276 NAQRKAILHLALKARIEKFLMENSE 300
            :..|.   :..|:.:|.|:|.::.:
Zfish  1046 DQIRP---NEELRQQIMKWLADHKQ 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2218NP_001287613.1 U-box 222..300 CDD:252675 28/80 (35%)
ube4aXP_009290012.1 UFD2 179..1075 CDD:227444 30/90 (33%)
Ufd2P_core 333..978 CDD:287392
U-box 995..1067 CDD:252675 28/80 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5113
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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