DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2218 and CG11070

DIOPT Version :9

Sequence 1:NP_001287613.1 Gene:CG2218 / 43611 FlyBaseID:FBgn0039767 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_609060.1 Gene:CG11070 / 33932 FlyBaseID:FBgn0028467 Length:993 Species:Drosophila melanogaster


Alignment Length:79 Identity:32/79 - (40%)
Similarity:40/79 - (50%) Gaps:8/79 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 PEEFLDSITWELMIFPTVLPSGKV-VDQSTIDKHAEEEAKWGRQPSDPFTGLEFNAQRKAILHLA 286
            |||:||.|...||..|.||||.|| ||:|||.:|...:      .:||| ..|.....|...:.|
  Fly   916 PEEYLDPIISTLMTDPVVLPSSKVTVDRSTIARHLLSD------QTDPF-NREPLTMDKVKSNEA 973

  Fly   287 LKARIEKFLMENSE 300
            ||..||.::....|
  Fly   974 LKQEIESWIQGKRE 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2218NP_001287613.1 U-box 222..300 CDD:252675 31/77 (40%)
CG11070NP_609060.1 Ufd2P_core 251..898 CDD:287392
U-box 915..987 CDD:252675 31/77 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5113
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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