DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRE11 and MRE11

DIOPT Version :10

Sequence 1:NP_001427389.1 Gene:MRE11 / 4361 HGNCID:7230 Length:725 Species:Homo sapiens
Sequence 2:NP_013951.1 Gene:MRE11 / 855264 SGDID:S000004837 Length:692 Species:Saccharomyces cerevisiae


Alignment Length:705 Identity:254/705 - (36%)
Similarity:367/705 - (52%) Gaps:122/705 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     9 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLH 73
            |.:|.:||:.||.|:|:.|.|.:.|:|::.|..|::.||:.|.||.::..|||||.||||:|:|:
Yeast     5 DPDTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGDLFHVNKPSKKSLY 69

Human    74 TCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADAL 138
            ..|:.||..||||:|.:.|:|||.|..|.:.:|..|||:|.|.|||||||.|.|||||.:|...|
Yeast    70 QVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFGISGNHDDASGDSLL 134

Human   139 CALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLRP 203
            |.:|||...|.:||||:.:..:||.:.|:|.||||||:|||||.::.||||:|.|.:..||...|
Yeast   135 CPMDILHATGLINHFGKVIESDKIKVVPLLFQKGSTKLALYGLAAVRDERLFRTFKDGGVTFEVP 199

Human   204 KEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEHECKIAPTKNEQQLFYISQPGS 268
            ...|..||||..:|||.:.|.:|.|:|||||.||:|:|||||||||......|..:.|.:.||||
Yeast   200 TMREGEWFNLMCVHQNHTGHTNTAFLPEQFLPDFLDMVIWGHEHECIPNLVHNPIKNFDVLQPGS 264

Human   269 SVVTSLSPGEAVKKHVGLLRIK-GRKMNMHKIPLHTVRQFFMEDIVLANHPDIFNPDNPKVTQAI 332
            ||.|||...||..|:|.:|.|| |....|..|||.|:|.|.|:.|.|.:.|.:    .|....|.
Yeast   265 SVATSLCEAEAQPKYVFILDIKYGEAPKMTPIPLETIRTFKMKSISLQDVPHL----RPHDKDAT 325

Human   333 QSFCLEKIEEMLENAERE---RLGNSHQPE------KPLVRLRVDYSG--------GFEPFSVLR 380
            ..:.:|::|||:.:|..|   :|.:..:.:      |||:|||||||.        .::..:..|
Yeast   326 SKYLIEQVEEMIRDANEETKQKLADDGEGDMVAELPKPLIRLRVDYSAPSNTQSPIDYQVENPRR 390

Human   381 FSQKFVDRVANPKDIIHFFRHRE---QKEKTG------EEINFGKLITKPSEGTTLRVEDLVKQY 436
            ||.:||.||||..:::.|::.|.   :.:|:|      .:.:..||.::  .|..|.|:.||...
Yeast   391 FSNRFVGRVANGNNVVQFYKKRSPVTRSKKSGINGTSISDRDVEKLFSE--SGGELEVQTLVNDL 453

Human   437 FQTAEKNVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKYQ-------LEKTQRFLKERHIDALE 494
            .    ..:|||||.|.|:.|||::||||:||.|::|.:.::       |...:.||  |..||.|
Yeast   454 L----NKMQLSLLPEVGLNEAVKKFVDKDEKTALKEFISHEISNEVGILSTNEEFL--RTDDAEE 512

Human   495 DK-IDEEVRRFRETRQKNTNEEDD------------------EVR-------------------- 520
            .| :.::|:|....|.....|.|:                  |||                    
Yeast   513 MKALIKQVKRANSVRPTPPKENDETNFAFNGNGLDSFRSSNREVRTGSPDITQSHVDNESRITHI 577

Human   521 ------EAMTRARALRSQSEESASAFSADDLMSIDLAEQMA--NDSDDSISAATN---------- 567
                  :..::.:.:|:.:::...|||...::| |...::.  ||:.|.:....|          
Yeast   578 SQAESSKPTSKPKRVRTATKKKIPAFSDSTVIS-DAENELGDNNDAQDDVDIDENDIIMVSTDEE 641

Human   568 -------KGRGRGRGRRGGRGQNSASRGGSQRGRADTGLETSTRSRNSKTAVSAS 615
                   .||......|......:|||.|  :|||         ||..||.:..|
Yeast   642 DASYGLLNGRKTKTKTRPAASTKTASRRG--KGRA---------SRTPKTDILGS 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRE11NP_001427389.1 None
MRE11NP_013951.1 mre11 6..413 CDD:273153 187/433 (43%)

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